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6W20

ClpAP Disengaged State bound to RepA-GFP

Functional Information from GO Data
ChainGOidnamespacecontents
A0004176molecular_functionATP-dependent peptidase activity
A0005515molecular_functionprotein binding
A0005524molecular_functionATP binding
A0005737cellular_componentcytoplasm
A0005829cellular_componentcytosol
A0006515biological_processprotein quality control for misfolded or incompletely synthesized proteins
A0006979biological_processresponse to oxidative stress
A0009368cellular_componentendopeptidase Clp complex
A0016887molecular_functionATP hydrolysis activity
A0034605biological_processcellular response to heat
A0043335biological_processprotein unfolding
B0004176molecular_functionATP-dependent peptidase activity
B0005515molecular_functionprotein binding
B0005524molecular_functionATP binding
B0005737cellular_componentcytoplasm
B0005829cellular_componentcytosol
B0006515biological_processprotein quality control for misfolded or incompletely synthesized proteins
B0006979biological_processresponse to oxidative stress
B0009368cellular_componentendopeptidase Clp complex
B0016887molecular_functionATP hydrolysis activity
B0034605biological_processcellular response to heat
B0043335biological_processprotein unfolding
C0004176molecular_functionATP-dependent peptidase activity
C0005515molecular_functionprotein binding
C0005524molecular_functionATP binding
C0005737cellular_componentcytoplasm
C0005829cellular_componentcytosol
C0006515biological_processprotein quality control for misfolded or incompletely synthesized proteins
C0006979biological_processresponse to oxidative stress
C0009368cellular_componentendopeptidase Clp complex
C0016887molecular_functionATP hydrolysis activity
C0034605biological_processcellular response to heat
C0043335biological_processprotein unfolding
D0004176molecular_functionATP-dependent peptidase activity
D0005515molecular_functionprotein binding
D0005524molecular_functionATP binding
D0005737cellular_componentcytoplasm
D0005829cellular_componentcytosol
D0006515biological_processprotein quality control for misfolded or incompletely synthesized proteins
D0006979biological_processresponse to oxidative stress
D0009368cellular_componentendopeptidase Clp complex
D0016887molecular_functionATP hydrolysis activity
D0034605biological_processcellular response to heat
D0043335biological_processprotein unfolding
E0004176molecular_functionATP-dependent peptidase activity
E0005515molecular_functionprotein binding
E0005524molecular_functionATP binding
E0005737cellular_componentcytoplasm
E0005829cellular_componentcytosol
E0006515biological_processprotein quality control for misfolded or incompletely synthesized proteins
E0006979biological_processresponse to oxidative stress
E0009368cellular_componentendopeptidase Clp complex
E0016887molecular_functionATP hydrolysis activity
E0034605biological_processcellular response to heat
E0043335biological_processprotein unfolding
F0004176molecular_functionATP-dependent peptidase activity
F0005515molecular_functionprotein binding
F0005524molecular_functionATP binding
F0005737cellular_componentcytoplasm
F0005829cellular_componentcytosol
F0006515biological_processprotein quality control for misfolded or incompletely synthesized proteins
F0006979biological_processresponse to oxidative stress
F0009368cellular_componentendopeptidase Clp complex
F0016887molecular_functionATP hydrolysis activity
F0034605biological_processcellular response to heat
F0043335biological_processprotein unfolding
G0004176molecular_functionATP-dependent peptidase activity
G0004252molecular_functionserine-type endopeptidase activity
G0005515molecular_functionprotein binding
G0005737cellular_componentcytoplasm
G0005829cellular_componentcytosol
G0006508biological_processproteolysis
G0006515biological_processprotein quality control for misfolded or incompletely synthesized proteins
G0008236molecular_functionserine-type peptidase activity
G0009266biological_processresponse to temperature stimulus
G0009314biological_processresponse to radiation
G0009368cellular_componentendopeptidase Clp complex
G0009376cellular_componentHslUV protease complex
G0009408biological_processresponse to heat
G0010498biological_processproteasomal protein catabolic process
G0016020cellular_componentmembrane
G0042802molecular_functionidentical protein binding
G0043068biological_processpositive regulation of programmed cell death
G0051117molecular_functionATPase binding
H0004176molecular_functionATP-dependent peptidase activity
H0004252molecular_functionserine-type endopeptidase activity
H0005515molecular_functionprotein binding
H0005737cellular_componentcytoplasm
H0005829cellular_componentcytosol
H0006508biological_processproteolysis
H0006515biological_processprotein quality control for misfolded or incompletely synthesized proteins
H0008236molecular_functionserine-type peptidase activity
H0009266biological_processresponse to temperature stimulus
H0009314biological_processresponse to radiation
H0009368cellular_componentendopeptidase Clp complex
H0009376cellular_componentHslUV protease complex
H0009408biological_processresponse to heat
H0010498biological_processproteasomal protein catabolic process
H0016020cellular_componentmembrane
H0042802molecular_functionidentical protein binding
H0043068biological_processpositive regulation of programmed cell death
H0051117molecular_functionATPase binding
I0004176molecular_functionATP-dependent peptidase activity
I0004252molecular_functionserine-type endopeptidase activity
I0005515molecular_functionprotein binding
I0005737cellular_componentcytoplasm
I0005829cellular_componentcytosol
I0006508biological_processproteolysis
I0006515biological_processprotein quality control for misfolded or incompletely synthesized proteins
I0008236molecular_functionserine-type peptidase activity
I0009266biological_processresponse to temperature stimulus
I0009314biological_processresponse to radiation
I0009368cellular_componentendopeptidase Clp complex
I0009376cellular_componentHslUV protease complex
I0009408biological_processresponse to heat
I0010498biological_processproteasomal protein catabolic process
I0016020cellular_componentmembrane
I0042802molecular_functionidentical protein binding
I0043068biological_processpositive regulation of programmed cell death
I0051117molecular_functionATPase binding
J0004176molecular_functionATP-dependent peptidase activity
J0004252molecular_functionserine-type endopeptidase activity
J0005515molecular_functionprotein binding
J0005737cellular_componentcytoplasm
J0005829cellular_componentcytosol
J0006508biological_processproteolysis
J0006515biological_processprotein quality control for misfolded or incompletely synthesized proteins
J0008236molecular_functionserine-type peptidase activity
J0009266biological_processresponse to temperature stimulus
J0009314biological_processresponse to radiation
J0009368cellular_componentendopeptidase Clp complex
J0009376cellular_componentHslUV protease complex
J0009408biological_processresponse to heat
J0010498biological_processproteasomal protein catabolic process
J0016020cellular_componentmembrane
J0042802molecular_functionidentical protein binding
J0043068biological_processpositive regulation of programmed cell death
J0051117molecular_functionATPase binding
K0004176molecular_functionATP-dependent peptidase activity
K0004252molecular_functionserine-type endopeptidase activity
K0005515molecular_functionprotein binding
K0005737cellular_componentcytoplasm
K0005829cellular_componentcytosol
K0006508biological_processproteolysis
K0006515biological_processprotein quality control for misfolded or incompletely synthesized proteins
K0008236molecular_functionserine-type peptidase activity
K0009266biological_processresponse to temperature stimulus
K0009314biological_processresponse to radiation
K0009368cellular_componentendopeptidase Clp complex
K0009376cellular_componentHslUV protease complex
K0009408biological_processresponse to heat
K0010498biological_processproteasomal protein catabolic process
K0016020cellular_componentmembrane
K0042802molecular_functionidentical protein binding
K0043068biological_processpositive regulation of programmed cell death
K0051117molecular_functionATPase binding
L0004176molecular_functionATP-dependent peptidase activity
L0004252molecular_functionserine-type endopeptidase activity
L0005515molecular_functionprotein binding
L0005737cellular_componentcytoplasm
L0005829cellular_componentcytosol
L0006508biological_processproteolysis
L0006515biological_processprotein quality control for misfolded or incompletely synthesized proteins
L0008236molecular_functionserine-type peptidase activity
L0009266biological_processresponse to temperature stimulus
L0009314biological_processresponse to radiation
L0009368cellular_componentendopeptidase Clp complex
L0009376cellular_componentHslUV protease complex
L0009408biological_processresponse to heat
L0010498biological_processproteasomal protein catabolic process
L0016020cellular_componentmembrane
L0042802molecular_functionidentical protein binding
L0043068biological_processpositive regulation of programmed cell death
L0051117molecular_functionATPase binding
M0004176molecular_functionATP-dependent peptidase activity
M0004252molecular_functionserine-type endopeptidase activity
M0005515molecular_functionprotein binding
M0005737cellular_componentcytoplasm
M0005829cellular_componentcytosol
M0006508biological_processproteolysis
M0006515biological_processprotein quality control for misfolded or incompletely synthesized proteins
M0008236molecular_functionserine-type peptidase activity
M0009266biological_processresponse to temperature stimulus
M0009314biological_processresponse to radiation
M0009368cellular_componentendopeptidase Clp complex
M0009376cellular_componentHslUV protease complex
M0009408biological_processresponse to heat
M0010498biological_processproteasomal protein catabolic process
M0016020cellular_componentmembrane
M0042802molecular_functionidentical protein binding
M0043068biological_processpositive regulation of programmed cell death
M0051117molecular_functionATPase binding
N0004176molecular_functionATP-dependent peptidase activity
N0004252molecular_functionserine-type endopeptidase activity
N0005515molecular_functionprotein binding
N0005737cellular_componentcytoplasm
N0005829cellular_componentcytosol
N0006508biological_processproteolysis
N0006515biological_processprotein quality control for misfolded or incompletely synthesized proteins
N0008236molecular_functionserine-type peptidase activity
N0009266biological_processresponse to temperature stimulus
N0009314biological_processresponse to radiation
N0009368cellular_componentendopeptidase Clp complex
N0009376cellular_componentHslUV protease complex
N0009408biological_processresponse to heat
N0010498biological_processproteasomal protein catabolic process
N0016020cellular_componentmembrane
N0042802molecular_functionidentical protein binding
N0043068biological_processpositive regulation of programmed cell death
N0051117molecular_functionATPase binding
O0004176molecular_functionATP-dependent peptidase activity
O0004252molecular_functionserine-type endopeptidase activity
O0005515molecular_functionprotein binding
O0005737cellular_componentcytoplasm
O0005829cellular_componentcytosol
O0006508biological_processproteolysis
O0006515biological_processprotein quality control for misfolded or incompletely synthesized proteins
O0008236molecular_functionserine-type peptidase activity
O0009266biological_processresponse to temperature stimulus
O0009314biological_processresponse to radiation
O0009368cellular_componentendopeptidase Clp complex
O0009376cellular_componentHslUV protease complex
O0009408biological_processresponse to heat
O0010498biological_processproteasomal protein catabolic process
O0016020cellular_componentmembrane
O0042802molecular_functionidentical protein binding
O0043068biological_processpositive regulation of programmed cell death
O0051117molecular_functionATPase binding
P0004176molecular_functionATP-dependent peptidase activity
P0004252molecular_functionserine-type endopeptidase activity
P0005515molecular_functionprotein binding
P0005737cellular_componentcytoplasm
P0005829cellular_componentcytosol
P0006508biological_processproteolysis
P0006515biological_processprotein quality control for misfolded or incompletely synthesized proteins
P0008236molecular_functionserine-type peptidase activity
P0009266biological_processresponse to temperature stimulus
P0009314biological_processresponse to radiation
P0009368cellular_componentendopeptidase Clp complex
P0009376cellular_componentHslUV protease complex
P0009408biological_processresponse to heat
P0010498biological_processproteasomal protein catabolic process
P0016020cellular_componentmembrane
P0042802molecular_functionidentical protein binding
P0043068biological_processpositive regulation of programmed cell death
P0051117molecular_functionATPase binding
Q0004176molecular_functionATP-dependent peptidase activity
Q0004252molecular_functionserine-type endopeptidase activity
Q0005515molecular_functionprotein binding
Q0005737cellular_componentcytoplasm
Q0005829cellular_componentcytosol
Q0006508biological_processproteolysis
Q0006515biological_processprotein quality control for misfolded or incompletely synthesized proteins
Q0008236molecular_functionserine-type peptidase activity
Q0009266biological_processresponse to temperature stimulus
Q0009314biological_processresponse to radiation
Q0009368cellular_componentendopeptidase Clp complex
Q0009376cellular_componentHslUV protease complex
Q0009408biological_processresponse to heat
Q0010498biological_processproteasomal protein catabolic process
Q0016020cellular_componentmembrane
Q0042802molecular_functionidentical protein binding
Q0043068biological_processpositive regulation of programmed cell death
Q0051117molecular_functionATPase binding
R0004176molecular_functionATP-dependent peptidase activity
R0004252molecular_functionserine-type endopeptidase activity
R0005515molecular_functionprotein binding
R0005737cellular_componentcytoplasm
R0005829cellular_componentcytosol
R0006508biological_processproteolysis
R0006515biological_processprotein quality control for misfolded or incompletely synthesized proteins
R0008236molecular_functionserine-type peptidase activity
R0009266biological_processresponse to temperature stimulus
R0009314biological_processresponse to radiation
R0009368cellular_componentendopeptidase Clp complex
R0009376cellular_componentHslUV protease complex
R0009408biological_processresponse to heat
R0010498biological_processproteasomal protein catabolic process
R0016020cellular_componentmembrane
R0042802molecular_functionidentical protein binding
R0043068biological_processpositive regulation of programmed cell death
R0051117molecular_functionATPase binding
S0004176molecular_functionATP-dependent peptidase activity
S0004252molecular_functionserine-type endopeptidase activity
S0005515molecular_functionprotein binding
S0005737cellular_componentcytoplasm
S0005829cellular_componentcytosol
S0006508biological_processproteolysis
S0006515biological_processprotein quality control for misfolded or incompletely synthesized proteins
S0008236molecular_functionserine-type peptidase activity
S0009266biological_processresponse to temperature stimulus
S0009314biological_processresponse to radiation
S0009368cellular_componentendopeptidase Clp complex
S0009376cellular_componentHslUV protease complex
S0009408biological_processresponse to heat
S0010498biological_processproteasomal protein catabolic process
S0016020cellular_componentmembrane
S0042802molecular_functionidentical protein binding
S0043068biological_processpositive regulation of programmed cell death
S0051117molecular_functionATPase binding
T0004176molecular_functionATP-dependent peptidase activity
T0004252molecular_functionserine-type endopeptidase activity
T0005515molecular_functionprotein binding
T0005737cellular_componentcytoplasm
T0005829cellular_componentcytosol
T0006508biological_processproteolysis
T0006515biological_processprotein quality control for misfolded or incompletely synthesized proteins
T0008236molecular_functionserine-type peptidase activity
T0009266biological_processresponse to temperature stimulus
T0009314biological_processresponse to radiation
T0009368cellular_componentendopeptidase Clp complex
T0009376cellular_componentHslUV protease complex
T0009408biological_processresponse to heat
T0010498biological_processproteasomal protein catabolic process
T0016020cellular_componentmembrane
T0042802molecular_functionidentical protein binding
T0043068biological_processpositive regulation of programmed cell death
T0051117molecular_functionATPase binding
Functional Information from PDB Data
site_idAC1
Number of Residues14
Detailsbinding site for residue ADP A 801
ChainResidue
AASP186
ALEU361
APRO395
AASP396
AILE399
FARG339
APRO187
ALEU188
AILE189
AGLY217
AGLY219
ALYS220
ATHR221
AILE357

site_idAC2
Number of Residues14
Detailsbinding site for residue ADP A 802
ChainResidue
AVAL460
APHE461
AGLN463
ATHR497
AGLY498
AVAL499
AGLY500
ALYS501
ATHR502
AGLU503
AVAL661
APHE665
AALA701
AARG702

site_idAC3
Number of Residues19
Detailsbinding site for residue ATP B 801
ChainResidue
AARG339
BPRO187
BLEU188
BILE189
BARG191
BGLU215
BSER216
BGLY217
BVAL218
BGLY219
BLYS220
BTHR221
BALA222
BTHR323
BILE357
BLEU361
BPRO395
BASP396
BILE399

site_idAC4
Number of Residues13
Detailsbinding site for residue ATP B 802
ChainResidue
BLEU459
BVAL460
BPHE461
BTHR497
BGLY498
BVAL499
BGLY500
BLYS501
BTHR502
BGLU503
BPHE665
BALA701
BARG702

site_idAC5
Number of Residues17
Detailsbinding site for residue ATP C 801
ChainResidue
BALA336
BARG339
BARG340
CASP186
CLEU188
CILE189
CARG191
CGLY217
CGLY219
CLYS220
CTHR221
CALA222
CTHR323
CILE357
CLEU361
CPRO395
CASP396

site_idAC6
Number of Residues14
Detailsbinding site for residue ATP C 802
ChainResidue
BARG643
CVAL460
CPHE461
CPRO496
CTHR497
CGLY498
CVAL499
CGLY500
CLYS501
CTHR502
CGLU503
CVAL661
CLYS664
CARG702

site_idAC7
Number of Residues18
Detailsbinding site for residue ATP D 801
ChainResidue
DSER216
DGLY217
DGLY219
DLYS220
DTHR221
DALA222
DTHR323
DLEU361
DPRO395
DILE399
CALA336
CARG339
CARG340
DASP186
DPRO187
DLEU188
DILE189
DARG191

site_idAC8
Number of Residues16
Detailsbinding site for residue ATP D 802
ChainResidue
CGLU639
CARG643
DVAL460
DPHE461
DTHR497
DGLY498
DVAL499
DGLY500
DLYS501
DTHR502
DGLU503
DGLU565
DASN606
DVAL661
DLYS664
DARG702

site_idAC9
Number of Residues14
Detailsbinding site for residue ATP E 801
ChainResidue
DARG339
ELEU188
EILE189
EARG191
ESER216
EGLY217
EGLY219
ELYS220
ETHR221
EALA222
EGLU286
ELEU361
ELYS364
EILE399

site_idAD1
Number of Residues18
Detailsbinding site for residue ATP E 802
ChainResidue
DARG643
ELEU459
EVAL460
EPHE461
EGLN463
ETHR497
EGLY498
EVAL499
EGLY500
ELYS501
ETHR502
EGLU503
EGLU565
EASN606
EVAL661
ELYS664
EALA701
EARG702

site_idAD2
Number of Residues8
Detailsbinding site for residue ADP F 801
ChainResidue
FPHE461
FTHR497
FGLY498
FVAL499
FTHR502
FLEU653
FVAL657
FLYS664

Functional Information from PROSITE/UniProt
site_idPS00870
Number of Residues13
DetailsCLPAB_1 Chaperonins clpA/B signature 1. DAANLIKPlLssG
ChainResidueDetails
AASP302-GLY314

site_idPS00871
Number of Residues19
DetailsCLPAB_2 Chaperonins clpA/B signature 2. RFDmSEYmERhTvSRLiGA
ChainResidueDetails
AARG518-ALA536

site_idPS00381
Number of Residues12
DetailsCLP_PROTEASE_SER Endopeptidase Clp serine active site. TicMGqAASMGA
ChainResidueDetails
GTHR103-ALA114

site_idPS00382
Number of Residues14
DetailsCLP_PROTEASE_HIS Endopeptidase Clp histidine active site. RfclPnsrVMIHQP
ChainResidueDetails
GARG125-PRO138

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues14
DetailsACT_SITE: Nucleophile => ECO:0000305
ChainResidueDetails
GSER111
HSER111
ISER111
JSER111
KSER111
LSER111
MSER111
NSER111
OSER111
PSER111
QSER111
RSER111
SSER111
TSER111

site_idSWS_FT_FI2
Number of Residues28
DetailsACT_SITE: ACT_SITE => ECO:0000305
ChainResidueDetails
GHIS136
GASP185
HHIS136
HASP185
IHIS136
IASP185
JHIS136
JASP185
KHIS136
KASP185
LHIS136
LASP185
MHIS136
MASP185
NHIS136
NASP185
OHIS136
OASP185
PHIS136
PASP185
QHIS136
QASP185
RHIS136
RASP185
SHIS136
SASP185
THIS136
TASP185

Catalytic Information from CSA
site_idMCSA1
Number of Residues5
DetailsM-CSA 912
ChainResidueDetails
GGLY82electrostatic stabiliser
GSER111covalent catalysis, proton shuttle (general acid/base)
GMET112electrostatic stabiliser
GHIS136proton shuttle (general acid/base)
GASP185electrostatic stabiliser, modifies pKa

site_idMCSA2
Number of Residues5
DetailsM-CSA 912
ChainResidueDetails
HGLY82electrostatic stabiliser
HSER111covalent catalysis, proton shuttle (general acid/base)
HMET112electrostatic stabiliser
HHIS136proton shuttle (general acid/base)
HASP185electrostatic stabiliser, modifies pKa

site_idMCSA3
Number of Residues5
DetailsM-CSA 912
ChainResidueDetails
IGLY82electrostatic stabiliser
ISER111covalent catalysis, proton shuttle (general acid/base)
IMET112electrostatic stabiliser
IHIS136proton shuttle (general acid/base)
IASP185electrostatic stabiliser, modifies pKa

site_idMCSA4
Number of Residues5
DetailsM-CSA 912
ChainResidueDetails
JGLY82electrostatic stabiliser
JSER111covalent catalysis, proton shuttle (general acid/base)
JMET112electrostatic stabiliser
JHIS136proton shuttle (general acid/base)
JASP185electrostatic stabiliser, modifies pKa

site_idMCSA5
Number of Residues5
DetailsM-CSA 912
ChainResidueDetails
KGLY82electrostatic stabiliser
KSER111covalent catalysis, proton shuttle (general acid/base)
KMET112electrostatic stabiliser
KHIS136proton shuttle (general acid/base)
KASP185electrostatic stabiliser, modifies pKa

site_idMCSA6
Number of Residues5
DetailsM-CSA 912
ChainResidueDetails
LGLY82electrostatic stabiliser
LSER111covalent catalysis, proton shuttle (general acid/base)
LMET112electrostatic stabiliser
LHIS136proton shuttle (general acid/base)
LASP185electrostatic stabiliser, modifies pKa

site_idMCSA7
Number of Residues5
DetailsM-CSA 912
ChainResidueDetails
MGLY82electrostatic stabiliser
MSER111covalent catalysis, proton shuttle (general acid/base)
MMET112electrostatic stabiliser
MHIS136proton shuttle (general acid/base)
MASP185electrostatic stabiliser, modifies pKa

site_idMCSA8
Number of Residues5
DetailsM-CSA 912
ChainResidueDetails
NGLY82electrostatic stabiliser
NSER111covalent catalysis, proton shuttle (general acid/base)
NMET112electrostatic stabiliser
NHIS136proton shuttle (general acid/base)
NASP185electrostatic stabiliser, modifies pKa

site_idMCSA9
Number of Residues5
DetailsM-CSA 912
ChainResidueDetails
OGLY82electrostatic stabiliser
OSER111covalent catalysis, proton shuttle (general acid/base)
OMET112electrostatic stabiliser
OHIS136proton shuttle (general acid/base)
OASP185electrostatic stabiliser, modifies pKa

site_idMCSA10
Number of Residues5
DetailsM-CSA 912
ChainResidueDetails
PGLY82electrostatic stabiliser
PSER111covalent catalysis, proton shuttle (general acid/base)
PMET112electrostatic stabiliser
PHIS136proton shuttle (general acid/base)
PASP185electrostatic stabiliser, modifies pKa

site_idMCSA11
Number of Residues5
DetailsM-CSA 912
ChainResidueDetails
QGLY82electrostatic stabiliser
QSER111covalent catalysis, proton shuttle (general acid/base)
QMET112electrostatic stabiliser
QHIS136proton shuttle (general acid/base)
QASP185electrostatic stabiliser, modifies pKa

site_idMCSA12
Number of Residues5
DetailsM-CSA 912
ChainResidueDetails
RGLY82electrostatic stabiliser
RSER111covalent catalysis, proton shuttle (general acid/base)
RMET112electrostatic stabiliser
RHIS136proton shuttle (general acid/base)
RASP185electrostatic stabiliser, modifies pKa

site_idMCSA13
Number of Residues5
DetailsM-CSA 912
ChainResidueDetails
SGLY82electrostatic stabiliser
SSER111covalent catalysis, proton shuttle (general acid/base)
SMET112electrostatic stabiliser
SHIS136proton shuttle (general acid/base)
SASP185electrostatic stabiliser, modifies pKa

site_idMCSA14
Number of Residues5
DetailsM-CSA 912
ChainResidueDetails
TGLY82electrostatic stabiliser
TSER111covalent catalysis, proton shuttle (general acid/base)
TMET112electrostatic stabiliser
THIS136proton shuttle (general acid/base)
TASP185electrostatic stabiliser, modifies pKa

221051

PDB entries from 2024-06-12

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