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6VXT

Activated Nitrogenase MoFe-protein from Azotobacter vinelandii

Functional Information from GO Data
ChainGOidnamespacecontents
A0005524molecular_functionATP binding
A0009399biological_processnitrogen fixation
A0016163molecular_functionnitrogenase activity
A0016491molecular_functionoxidoreductase activity
A0016612cellular_componentmolybdenum-iron nitrogenase complex
A0046872molecular_functionmetal ion binding
A0051536molecular_functioniron-sulfur cluster binding
B0005524molecular_functionATP binding
B0009399biological_processnitrogen fixation
B0016163molecular_functionnitrogenase activity
B0016491molecular_functionoxidoreductase activity
B0016612cellular_componentmolybdenum-iron nitrogenase complex
B0046872molecular_functionmetal ion binding
B0051536molecular_functioniron-sulfur cluster binding
C0005524molecular_functionATP binding
C0009399biological_processnitrogen fixation
C0016163molecular_functionnitrogenase activity
C0016491molecular_functionoxidoreductase activity
C0016612cellular_componentmolybdenum-iron nitrogenase complex
C0046872molecular_functionmetal ion binding
C0051536molecular_functioniron-sulfur cluster binding
D0005524molecular_functionATP binding
D0009399biological_processnitrogen fixation
D0016163molecular_functionnitrogenase activity
D0016491molecular_functionoxidoreductase activity
D0016612cellular_componentmolybdenum-iron nitrogenase complex
D0046872molecular_functionmetal ion binding
D0051536molecular_functioniron-sulfur cluster binding
Functional Information from PDB Data
site_idAC1
Number of Residues16
Detailsbinding site for residue HCA A 601
ChainResidue
AALA65
AHOH768
AHOH811
AHOH876
AHOH886
BHOH716
BHOH769
BHOH865
AGLN191
AGLY424
AILE425
AHIS442
AICS602
AHOH721
AHOH732
AHOH735

site_idAC2
Number of Residues12
Detailsbinding site for residue ICS A 602
ChainResidue
AVAL70
AARG96
AHIS195
ATYR229
ACYS275
AGLY356
AGLY357
ALEU358
AARG359
APHE381
AHIS442
AHCA601

site_idAC3
Number of Residues3
Detailsbinding site for residue MO A 603
ChainResidue
AASN29
ALEU32
ACYS45

site_idAC4
Number of Residues1
Detailsbinding site for residue MO A 604
ChainResidue
ATRP294

site_idAC5
Number of Residues6
Detailsbinding site for residue H2S A 605
ChainResidue
AARG93
ATHR104
ATHR111
BPHE450
BARG453
BHOH989

site_idAC6
Number of Residues3
Detailsbinding site for residue MO A 606
ChainResidue
APRO37
AVAL39
DHOH733

site_idAC7
Number of Residues1
Detailsbinding site for residue MO A 607
ChainResidue
AASP204

site_idAC8
Number of Residues15
Detailsbinding site for residue CLF A 608
ChainResidue
ACYS62
ATYR64
APRO85
AGLY87
ACYS88
ATYR91
ACYS154
AGLY185
BCYS70
BSER92
BCYS95
BTYR98
BTHR152
BCYS153
BSER188

site_idAC9
Number of Residues7
Detailsbinding site for residue FE B 601
ChainResidue
BASP353
BASP357
CPHE429
CLYS433
CHOH892
DARG108
DGLU109

site_idAD1
Number of Residues6
Detailsbinding site for residue GOL B 602
ChainResidue
BPHE230
BGLU231
BTHR232
BTYR233
BPHE471
BHOH766

site_idAD2
Number of Residues7
Detailsbinding site for residue GOL B 603
ChainResidue
BTHR360
BTRP361
BHOH951
CASP445
CTYR446
CARG461
CHOH841

site_idAD3
Number of Residues8
Detailsbinding site for residue GOL B 604
ChainResidue
BARG59
BGLU60
BALA61
BLEU62
BGLY424
BHOH727
BHOH733
BHOH773

site_idAD4
Number of Residues4
Detailsbinding site for residue GOL B 605
ChainResidue
BGLN513
BALA514
BHOH973
DPHE15

site_idAD5
Number of Residues5
Detailsbinding site for residue FE B 606
ChainResidue
APHE429
AHOH921
BARG108
DASP353
DASP357

site_idAD6
Number of Residues16
Detailsbinding site for residue HCA C 601
ChainResidue
CICS602
CHOH744
CHOH750
CHOH770
CHOH801
CHOH803
CHOH813
CHOH840
CHOH861
DHOH727
DHOH793
CALA65
CGLN191
CGLY424
CILE425
CHIS442

site_idAD7
Number of Residues12
Detailsbinding site for residue ICS C 602
ChainResidue
CVAL70
CARG96
CHIS195
CTYR229
CCYS275
CGLY356
CGLY357
CLEU358
CARG359
CPHE381
CHIS442
CHCA601

site_idAD8
Number of Residues3
Detailsbinding site for residue MO C 603
ChainResidue
CASN29
CLEU32
CCYS45

site_idAD9
Number of Residues1
Detailsbinding site for residue MO C 604
ChainResidue
CTRP294

site_idAE1
Number of Residues4
Detailsbinding site for residue MO C 605
ChainResidue
BVAL124
BHOH712
CPRO37
CVAL39

site_idAE2
Number of Residues3
Detailsbinding site for residue MO C 606
ChainResidue
CASP204
CTRP205
CHOH940

site_idAE3
Number of Residues14
Detailsbinding site for residue CLF C 607
ChainResidue
CCYS62
CTYR64
CPRO85
CGLY87
CCYS88
CTYR91
CCYS154
CGLY185
DCYS70
DSER92
DCYS95
DTYR98
DCYS153
DSER188

site_idAE4
Number of Residues6
Detailsbinding site for residue H2S D 601
ChainResidue
CARG93
CTHR104
CTHR111
DPHE450
DARG453
DHOH960

site_idAE5
Number of Residues6
Detailsbinding site for residue GOL D 602
ChainResidue
DPRO182
DPHE183
DGLY203
DARG206
DTYR207
DHOH786

site_idAE6
Number of Residues8
Detailsbinding site for residue GOL D 603
ChainResidue
DPHE230
DGLU231
DTHR232
DTYR233
DPHE375
DPHE471
DHOH729
DHOH844

site_idAE7
Number of Residues8
Detailsbinding site for residue GOL D 604
ChainResidue
AASP445
AARG461
AMET465
AHOH825
AHOH835
BALA10
DTHR360
DTRP361

Functional Information from PROSITE/UniProt
site_idPS00090
Number of Residues15
DetailsNITROGENASE_1_2 Nitrogenases component 1 alpha and beta subunits signature 2. SECpigliGDDIeSV
ChainResidueDetails
ASER152-VAL166
BTHR151-PHE165

site_idPS00699
Number of Residues8
DetailsNITROGENASE_1_1 Nitrogenases component 1 alpha and beta subunits signature 1. ISHGPVGC
ChainResidueDetails
AILE81-CYS88
BTYR88-CYS95

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues8
DetailsBINDING:
ChainResidueDetails
BCYS70
CHIS442
BCYS95
BCYS153
BSER188
DCYS70
DCYS95
DCYS153
DSER188
CCYS275

Catalytic Information from CSA
site_idMCSA1
Number of Residues2
DetailsM-CSA 212
ChainResidueDetails
BCYS153metal ligand
BVAL157polar interaction, single electron acceptor, single electron donor, single electron relay
AARG96activator, hydrogen bond donor
AHIS195activator, polar interaction

site_idMCSA2
Number of Residues2
DetailsM-CSA 212
ChainResidueDetails
DCYS153metal ligand
DVAL157polar interaction, single electron acceptor, single electron donor, single electron relay
CARG96activator, hydrogen bond donor
CHIS195activator, polar interaction

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PDB entries from 2024-11-06

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