6VVH
Arabidopsis thaliana dihydrodipicolinate synthase isoform 1 (DHDPS1) in complex with lysine
This is a non-PDB format compatible entry.
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| AAA | 0008840 | molecular_function | 4-hydroxy-tetrahydrodipicolinate synthase activity |
| AAA | 0009089 | biological_process | lysine biosynthetic process via diaminopimelate |
| AAA | 0016829 | molecular_function | lyase activity |
| BBB | 0008840 | molecular_function | 4-hydroxy-tetrahydrodipicolinate synthase activity |
| BBB | 0009089 | biological_process | lysine biosynthetic process via diaminopimelate |
| BBB | 0016829 | molecular_function | lyase activity |
| CCC | 0008840 | molecular_function | 4-hydroxy-tetrahydrodipicolinate synthase activity |
| CCC | 0009089 | biological_process | lysine biosynthetic process via diaminopimelate |
| CCC | 0016829 | molecular_function | lyase activity |
| DDD | 0008840 | molecular_function | 4-hydroxy-tetrahydrodipicolinate synthase activity |
| DDD | 0009089 | biological_process | lysine biosynthetic process via diaminopimelate |
| DDD | 0016829 | molecular_function | lyase activity |
Functional Information from PROSITE/UniProt
| site_id | PS00665 |
| Number of Residues | 18 |
| Details | DHDPS_1 Dihydrodipicolinate synthase signature 1. GVIvgGTTGEGqlmswdE |
| Chain | Residue | Details |
| AAA | GLY101-GLU118 |
| site_id | PS00666 |
| Number of Residues | 31 |
| Details | DHDPS_2 Dihydrodipicolinate synthase signature 2. YNVPgrTcqdIppqvifklsqnpn.MaGVKEC |
| Chain | Residue | Details |
| AAA | TYR194-CYS224 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 4 |
| Details | ACT_SITE: Proton donor/acceptor => ECO:0000250 |
| Chain | Residue | Details |
| BBB | TYR194 | |
| CCC | TYR194 | |
| DDD | TYR194 | |
| AAA | TYR194 |
| site_id | SWS_FT_FI2 |
| Number of Residues | 4 |
| Details | ACT_SITE: Schiff-base intermediate with substrate => ECO:0000250 |
| Chain | Residue | Details |
| BBB | LYS222 | |
| CCC | LYS222 | |
| DDD | LYS222 | |
| AAA | LYS222 |
| site_id | SWS_FT_FI3 |
| Number of Residues | 8 |
| Details | BINDING: BINDING => ECO:0000250 |
| Chain | Residue | Details |
| CCC | THR108 | |
| CCC | ILE261 | |
| DDD | THR108 | |
| DDD | ILE261 | |
| AAA | ILE261 | |
| BBB | THR108 | |
| BBB | ILE261 | |
| AAA | THR108 |
| site_id | SWS_FT_FI4 |
| Number of Residues | 8 |
| Details | SITE: Part of a proton relay during catalysis => ECO:0000250 |
| Chain | Residue | Details |
| CCC | THR107 | |
| CCC | TYR170 | |
| DDD | THR107 | |
| DDD | TYR170 | |
| AAA | TYR170 | |
| BBB | THR107 | |
| BBB | TYR170 | |
| AAA | THR107 |
