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6VT1

Naegleria gruberi RNA ligase D172A mutant apo

Functional Information from GO Data
ChainGOidnamespacecontents
A0005524molecular_functionATP binding
A0046872molecular_functionmetal ion binding
B0005524molecular_functionATP binding
B0046872molecular_functionmetal ion binding
C0005524molecular_functionATP binding
C0046872molecular_functionmetal ion binding
D0005524molecular_functionATP binding
D0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues14
Detailsbinding site for residue AMP A 401
ChainResidue
ATHR145
AVAL281
AGLU312
AVAL315
ALYS317
ALYS326
ATHR168
AVAL169
ALYS170
ALEU171
ASER175
AARG190
AGLU227
APHE248

site_idAC2
Number of Residues14
Detailsbinding site for Di-peptide AMP B 401 and LYS B 170
ChainResidue
BTHR145
BTHR168
BVAL169
BLEU171
BSER175
BGLU227
BPHE248
BVAL281
BGLU312
BGLY313
BVAL315
BLYS317
BLYS326
BHOH526

site_idAC3
Number of Residues15
Detailsbinding site for Di-peptide AMP C 401 and LYS C 170
ChainResidue
CTHR145
CTHR168
CVAL169
CLEU171
CSER175
CGLU227
CPHE248
CVAL281
CGLU312
CGLY313
CVAL315
CLYS317
CLYS326
CHOH518
CHOH521

site_idAC4
Number of Residues16
Detailsbinding site for Di-peptide AMP D 401 and LYS D 170
ChainResidue
DTHR145
DTHR168
DVAL169
DLEU171
DSER175
DARG190
DGLU227
DPHE248
DVAL281
DGLU312
DGLY313
DVAL315
DLYS317
DLYS326
DHOH520
DHOH543

222036

PDB entries from 2024-07-03

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