6VPR
Crystal structure of the C-terminal domain of DENR
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0001731 | biological_process | formation of translation preinitiation complex |
| A | 0002183 | biological_process | cytoplasmic translational initiation |
| A | 0002188 | biological_process | translation reinitiation |
| A | 0003743 | molecular_function | translation initiation factor activity |
| A | 0005515 | molecular_function | protein binding |
| A | 0005737 | cellular_component | cytoplasm |
| A | 0006412 | biological_process | translation |
| A | 0006413 | biological_process | translational initiation |
| A | 0032790 | biological_process | ribosome disassembly |
| A | 0075522 | biological_process | IRES-dependent viral translational initiation |
| B | 0001731 | biological_process | formation of translation preinitiation complex |
| B | 0002183 | biological_process | cytoplasmic translational initiation |
| B | 0002188 | biological_process | translation reinitiation |
| B | 0003743 | molecular_function | translation initiation factor activity |
| B | 0005515 | molecular_function | protein binding |
| B | 0005737 | cellular_component | cytoplasm |
| B | 0006412 | biological_process | translation |
| B | 0006413 | biological_process | translational initiation |
| B | 0032790 | biological_process | ribosome disassembly |
| B | 0075522 | biological_process | IRES-dependent viral translational initiation |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 6 |
| Details | binding site for residue TLA A 201 |
| Chain | Residue |
| A | ARG122 |
| A | LYS124 |
| A | LYS126 |
| A | GLN167 |
| A | HG207 |
| B | TLA301 |
| site_id | AC2 |
| Number of Residues | 4 |
| Details | binding site for residue TLA A 202 |
| Chain | Residue |
| B | GLU161 |
| A | LYS142 |
| A | ARG146 |
| B | GLY160 |
| site_id | AC3 |
| Number of Residues | 5 |
| Details | binding site for residue SO4 A 203 |
| Chain | Residue |
| A | LYS126 |
| A | LYS126 |
| A | TYR127 |
| A | GLY168 |
| A | ASP169 |
| site_id | AC4 |
| Number of Residues | 2 |
| Details | binding site for residue SO4 A 204 |
| Chain | Residue |
| A | GLU161 |
| B | ARG122 |
| site_id | AC5 |
| Number of Residues | 1 |
| Details | binding site for residue ACT A 205 |
| Chain | Residue |
| A | HG207 |
| site_id | AC6 |
| Number of Residues | 2 |
| Details | binding site for residue HG A 206 |
| Chain | Residue |
| A | CYS132 |
| A | GLU163 |
| site_id | AC7 |
| Number of Residues | 4 |
| Details | binding site for residue HG A 207 |
| Chain | Residue |
| A | CYS154 |
| A | GLN167 |
| A | TLA201 |
| A | ACT205 |
| site_id | AC8 |
| Number of Residues | 6 |
| Details | binding site for residue TLA B 301 |
| Chain | Residue |
| A | GLN167 |
| A | TLA201 |
| B | ARG130 |
| B | LEU193 |
| B | GLU195 |
| B | HOH401 |
| site_id | AC9 |
| Number of Residues | 5 |
| Details | binding site for residue TLA B 302 |
| Chain | Residue |
| A | ARG122 |
| A | ALA123 |
| A | LYS125 |
| B | LYS125 |
| B | TYR127 |
| site_id | AD1 |
| Number of Residues | 2 |
| Details | binding site for residue PO4 B 303 |
| Chain | Residue |
| B | GLN145 |
| B | ARG146 |
| site_id | AD2 |
| Number of Residues | 1 |
| Details | binding site for residue SO4 B 304 |
| Chain | Residue |
| B | ASP169 |
| site_id | AD3 |
| Number of Residues | 3 |
| Details | binding site for residue ACT B 305 |
| Chain | Residue |
| B | GLY155 |
| B | HG308 |
| B | HOH407 |
| site_id | AD4 |
| Number of Residues | 2 |
| Details | binding site for residue ACT B 306 |
| Chain | Residue |
| B | HG307 |
| B | HOH401 |
| site_id | AD5 |
| Number of Residues | 3 |
| Details | binding site for residue HG B 307 |
| Chain | Residue |
| B | CYS132 |
| B | GLU163 |
| B | ACT306 |
| site_id | AD6 |
| Number of Residues | 3 |
| Details | binding site for residue HG B 308 |
| Chain | Residue |
| B | CYS154 |
| B | GLN167 |
| B | ACT305 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 134 |
| Details | Domain: {"description":"SUI1","evidences":[{"source":"PROSITE-ProRule","id":"PRU00200","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI2 |
| Number of Residues | 2 |
| Details | Modified residue: {"description":"Phosphoserine","evidences":[{"source":"UniProtKB","id":"Q9CQJ6","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
