Summary Structural details Experimental details Functional details Sequence Neighbor History Downloads

6VMB

Chloroplast ATP synthase (C1, CF1FO)

Functional Information from GO Data

Chain	GOid	namespace	contents
A	0005524	molecular_function	ATP binding
A	0006754	biological_process	ATP biosynthetic process
A	0009507	cellular_component	chloroplast
A	0009535	cellular_component	chloroplast thylakoid membrane
A	0009579	cellular_component	thylakoid
A	0015986	biological_process	proton motive force-driven ATP synthesis
A	0016020	cellular_component	membrane
A	0032559	molecular_function	adenyl ribonucleotide binding
A	0043531	molecular_function	ADP binding
A	0045261	cellular_component	proton-transporting ATP synthase complex, catalytic core F(1)
A	0046034	biological_process	ATP metabolic process
A	0046933	molecular_function	proton-transporting ATP synthase activity, rotational mechanism
A	0046961	molecular_function	proton-transporting ATPase activity, rotational mechanism
A	1902600	biological_process	proton transmembrane transport
B	0005524	molecular_function	ATP binding
B	0006754	biological_process	ATP biosynthetic process
B	0009507	cellular_component	chloroplast
B	0009535	cellular_component	chloroplast thylakoid membrane
B	0009579	cellular_component	thylakoid
B	0015986	biological_process	proton motive force-driven ATP synthesis
B	0016020	cellular_component	membrane
B	0032559	molecular_function	adenyl ribonucleotide binding
B	0043531	molecular_function	ADP binding
B	0045261	cellular_component	proton-transporting ATP synthase complex, catalytic core F(1)
B	0046034	biological_process	ATP metabolic process
B	0046933	molecular_function	proton-transporting ATP synthase activity, rotational mechanism
B	0046961	molecular_function	proton-transporting ATPase activity, rotational mechanism
B	1902600	biological_process	proton transmembrane transport
C	0005524	molecular_function	ATP binding
C	0006754	biological_process	ATP biosynthetic process
C	0009507	cellular_component	chloroplast
C	0009535	cellular_component	chloroplast thylakoid membrane
C	0009579	cellular_component	thylakoid
C	0015986	biological_process	proton motive force-driven ATP synthesis
C	0016020	cellular_component	membrane
C	0032559	molecular_function	adenyl ribonucleotide binding
C	0043531	molecular_function	ADP binding
C	0045261	cellular_component	proton-transporting ATP synthase complex, catalytic core F(1)
C	0046034	biological_process	ATP metabolic process
C	0046933	molecular_function	proton-transporting ATP synthase activity, rotational mechanism
C	0046961	molecular_function	proton-transporting ATPase activity, rotational mechanism
C	1902600	biological_process	proton transmembrane transport
D	0005524	molecular_function	ATP binding
D	0005739	cellular_component	mitochondrion
D	0006754	biological_process	ATP biosynthetic process
D	0009507	cellular_component	chloroplast
D	0009535	cellular_component	chloroplast thylakoid membrane
D	0009579	cellular_component	thylakoid
D	0015986	biological_process	proton motive force-driven ATP synthesis
D	0016020	cellular_component	membrane
D	0016887	molecular_function	ATP hydrolysis activity
D	0042776	biological_process	proton motive force-driven mitochondrial ATP synthesis
D	0045259	cellular_component	proton-transporting ATP synthase complex
D	0045261	cellular_component	proton-transporting ATP synthase complex, catalytic core F(1)
D	0046034	biological_process	ATP metabolic process
D	0046933	molecular_function	proton-transporting ATP synthase activity, rotational mechanism
D	0046961	molecular_function	proton-transporting ATPase activity, rotational mechanism
D	1902600	biological_process	proton transmembrane transport
E	0005524	molecular_function	ATP binding
E	0005739	cellular_component	mitochondrion
E	0006754	biological_process	ATP biosynthetic process
E	0009507	cellular_component	chloroplast
E	0009535	cellular_component	chloroplast thylakoid membrane
E	0009579	cellular_component	thylakoid
E	0015986	biological_process	proton motive force-driven ATP synthesis
E	0016020	cellular_component	membrane
E	0016887	molecular_function	ATP hydrolysis activity
E	0042776	biological_process	proton motive force-driven mitochondrial ATP synthesis
E	0045259	cellular_component	proton-transporting ATP synthase complex
E	0045261	cellular_component	proton-transporting ATP synthase complex, catalytic core F(1)
E	0046034	biological_process	ATP metabolic process
E	0046933	molecular_function	proton-transporting ATP synthase activity, rotational mechanism
E	0046961	molecular_function	proton-transporting ATPase activity, rotational mechanism
E	1902600	biological_process	proton transmembrane transport
F	0005524	molecular_function	ATP binding
F	0005739	cellular_component	mitochondrion
F	0006754	biological_process	ATP biosynthetic process
F	0009507	cellular_component	chloroplast
F	0009535	cellular_component	chloroplast thylakoid membrane
F	0009579	cellular_component	thylakoid
F	0015986	biological_process	proton motive force-driven ATP synthesis
F	0016020	cellular_component	membrane
F	0016887	molecular_function	ATP hydrolysis activity
F	0042776	biological_process	proton motive force-driven mitochondrial ATP synthesis
F	0045259	cellular_component	proton-transporting ATP synthase complex
F	0045261	cellular_component	proton-transporting ATP synthase complex, catalytic core F(1)
F	0046034	biological_process	ATP metabolic process
F	0046933	molecular_function	proton-transporting ATP synthase activity, rotational mechanism
F	0046961	molecular_function	proton-transporting ATPase activity, rotational mechanism
F	1902600	biological_process	proton transmembrane transport
I	0005524	molecular_function	ATP binding
I	0006754	biological_process	ATP biosynthetic process
I	0009507	cellular_component	chloroplast
I	0009535	cellular_component	chloroplast thylakoid membrane
I	0009579	cellular_component	thylakoid
I	0015078	molecular_function	proton transmembrane transporter activity
I	0015986	biological_process	proton motive force-driven ATP synthesis
I	0016020	cellular_component	membrane
I	0045263	cellular_component	proton-transporting ATP synthase complex, coupling factor F(o)
I	0046933	molecular_function	proton-transporting ATP synthase activity, rotational mechanism
I	1902600	biological_process	proton transmembrane transport
J	0005524	molecular_function	ATP binding
J	0009507	cellular_component	chloroplast
J	0009535	cellular_component	chloroplast thylakoid membrane
J	0009579	cellular_component	thylakoid
J	0015078	molecular_function	proton transmembrane transporter activity
J	0015986	biological_process	proton motive force-driven ATP synthesis
J	0016020	cellular_component	membrane
J	0045263	cellular_component	proton-transporting ATP synthase complex, coupling factor F(o)
J	0046961	molecular_function	proton-transporting ATPase activity, rotational mechanism
J	1902600	biological_process	proton transmembrane transport
M	0006754	biological_process	ATP biosynthetic process
M	0008289	molecular_function	lipid binding
M	0009507	cellular_component	chloroplast
M	0009535	cellular_component	chloroplast thylakoid membrane
M	0009579	cellular_component	thylakoid
M	0015078	molecular_function	proton transmembrane transporter activity
M	0015986	biological_process	proton motive force-driven ATP synthesis
M	0016020	cellular_component	membrane
M	0033177	cellular_component	proton-transporting two-sector ATPase complex, proton-transporting domain
M	0045263	cellular_component	proton-transporting ATP synthase complex, coupling factor F(o)
M	0046933	molecular_function	proton-transporting ATP synthase activity, rotational mechanism
M	1902600	biological_process	proton transmembrane transport
N	0006754	biological_process	ATP biosynthetic process
N	0008289	molecular_function	lipid binding
N	0009507	cellular_component	chloroplast
N	0009535	cellular_component	chloroplast thylakoid membrane
N	0009579	cellular_component	thylakoid
N	0015078	molecular_function	proton transmembrane transporter activity
N	0015986	biological_process	proton motive force-driven ATP synthesis
N	0016020	cellular_component	membrane
N	0033177	cellular_component	proton-transporting two-sector ATPase complex, proton-transporting domain
N	0045263	cellular_component	proton-transporting ATP synthase complex, coupling factor F(o)
N	0046933	molecular_function	proton-transporting ATP synthase activity, rotational mechanism
N	1902600	biological_process	proton transmembrane transport
O	0006754	biological_process	ATP biosynthetic process
O	0008289	molecular_function	lipid binding
O	0009507	cellular_component	chloroplast
O	0009535	cellular_component	chloroplast thylakoid membrane
O	0009579	cellular_component	thylakoid
O	0015078	molecular_function	proton transmembrane transporter activity
O	0015986	biological_process	proton motive force-driven ATP synthesis
O	0016020	cellular_component	membrane
O	0033177	cellular_component	proton-transporting two-sector ATPase complex, proton-transporting domain
O	0045263	cellular_component	proton-transporting ATP synthase complex, coupling factor F(o)
O	0046933	molecular_function	proton-transporting ATP synthase activity, rotational mechanism
O	1902600	biological_process	proton transmembrane transport
P	0006754	biological_process	ATP biosynthetic process
P	0008289	molecular_function	lipid binding
P	0009507	cellular_component	chloroplast
P	0009535	cellular_component	chloroplast thylakoid membrane
P	0009579	cellular_component	thylakoid
P	0015078	molecular_function	proton transmembrane transporter activity
P	0015986	biological_process	proton motive force-driven ATP synthesis
P	0016020	cellular_component	membrane
P	0033177	cellular_component	proton-transporting two-sector ATPase complex, proton-transporting domain
P	0045263	cellular_component	proton-transporting ATP synthase complex, coupling factor F(o)
P	0046933	molecular_function	proton-transporting ATP synthase activity, rotational mechanism
P	1902600	biological_process	proton transmembrane transport
Q	0006754	biological_process	ATP biosynthetic process
Q	0008289	molecular_function	lipid binding
Q	0009507	cellular_component	chloroplast
Q	0009535	cellular_component	chloroplast thylakoid membrane
Q	0009579	cellular_component	thylakoid
Q	0015078	molecular_function	proton transmembrane transporter activity
Q	0015986	biological_process	proton motive force-driven ATP synthesis
Q	0016020	cellular_component	membrane
Q	0033177	cellular_component	proton-transporting two-sector ATPase complex, proton-transporting domain
Q	0045263	cellular_component	proton-transporting ATP synthase complex, coupling factor F(o)
Q	0046933	molecular_function	proton-transporting ATP synthase activity, rotational mechanism
Q	1902600	biological_process	proton transmembrane transport
R	0006754	biological_process	ATP biosynthetic process
R	0008289	molecular_function	lipid binding
R	0009507	cellular_component	chloroplast
R	0009535	cellular_component	chloroplast thylakoid membrane
R	0009579	cellular_component	thylakoid
R	0015078	molecular_function	proton transmembrane transporter activity
R	0015986	biological_process	proton motive force-driven ATP synthesis
R	0016020	cellular_component	membrane
R	0033177	cellular_component	proton-transporting two-sector ATPase complex, proton-transporting domain
R	0045263	cellular_component	proton-transporting ATP synthase complex, coupling factor F(o)
R	0046933	molecular_function	proton-transporting ATP synthase activity, rotational mechanism
R	1902600	biological_process	proton transmembrane transport
S	0006754	biological_process	ATP biosynthetic process
S	0008289	molecular_function	lipid binding
S	0009507	cellular_component	chloroplast
S	0009535	cellular_component	chloroplast thylakoid membrane
S	0009579	cellular_component	thylakoid
S	0015078	molecular_function	proton transmembrane transporter activity
S	0015986	biological_process	proton motive force-driven ATP synthesis
S	0016020	cellular_component	membrane
S	0033177	cellular_component	proton-transporting two-sector ATPase complex, proton-transporting domain
S	0045263	cellular_component	proton-transporting ATP synthase complex, coupling factor F(o)
S	0046933	molecular_function	proton-transporting ATP synthase activity, rotational mechanism
S	1902600	biological_process	proton transmembrane transport
T	0006754	biological_process	ATP biosynthetic process
T	0008289	molecular_function	lipid binding
T	0009507	cellular_component	chloroplast
T	0009535	cellular_component	chloroplast thylakoid membrane
T	0009579	cellular_component	thylakoid
T	0015078	molecular_function	proton transmembrane transporter activity
T	0015986	biological_process	proton motive force-driven ATP synthesis
T	0016020	cellular_component	membrane
T	0033177	cellular_component	proton-transporting two-sector ATPase complex, proton-transporting domain
T	0045263	cellular_component	proton-transporting ATP synthase complex, coupling factor F(o)
T	0046933	molecular_function	proton-transporting ATP synthase activity, rotational mechanism
T	1902600	biological_process	proton transmembrane transport
U	0006754	biological_process	ATP biosynthetic process
U	0008289	molecular_function	lipid binding
U	0009507	cellular_component	chloroplast
U	0009535	cellular_component	chloroplast thylakoid membrane
U	0009579	cellular_component	thylakoid
U	0015078	molecular_function	proton transmembrane transporter activity
U	0015986	biological_process	proton motive force-driven ATP synthesis
U	0016020	cellular_component	membrane
U	0033177	cellular_component	proton-transporting two-sector ATPase complex, proton-transporting domain
U	0045263	cellular_component	proton-transporting ATP synthase complex, coupling factor F(o)
U	0046933	molecular_function	proton-transporting ATP synthase activity, rotational mechanism
U	1902600	biological_process	proton transmembrane transport
V	0006754	biological_process	ATP biosynthetic process
V	0008289	molecular_function	lipid binding
V	0009507	cellular_component	chloroplast
V	0009535	cellular_component	chloroplast thylakoid membrane
V	0009579	cellular_component	thylakoid
V	0015078	molecular_function	proton transmembrane transporter activity
V	0015986	biological_process	proton motive force-driven ATP synthesis
V	0016020	cellular_component	membrane
V	0033177	cellular_component	proton-transporting two-sector ATPase complex, proton-transporting domain
V	0045263	cellular_component	proton-transporting ATP synthase complex, coupling factor F(o)
V	0046933	molecular_function	proton-transporting ATP synthase activity, rotational mechanism
V	1902600	biological_process	proton transmembrane transport
W	0006754	biological_process	ATP biosynthetic process
W	0008289	molecular_function	lipid binding
W	0009507	cellular_component	chloroplast
W	0009535	cellular_component	chloroplast thylakoid membrane
W	0009579	cellular_component	thylakoid
W	0015078	molecular_function	proton transmembrane transporter activity
W	0015986	biological_process	proton motive force-driven ATP synthesis
W	0016020	cellular_component	membrane
W	0033177	cellular_component	proton-transporting two-sector ATPase complex, proton-transporting domain
W	0045263	cellular_component	proton-transporting ATP synthase complex, coupling factor F(o)
W	0046933	molecular_function	proton-transporting ATP synthase activity, rotational mechanism
W	1902600	biological_process	proton transmembrane transport
X	0006754	biological_process	ATP biosynthetic process
X	0008289	molecular_function	lipid binding
X	0009507	cellular_component	chloroplast
X	0009535	cellular_component	chloroplast thylakoid membrane
X	0009579	cellular_component	thylakoid
X	0015078	molecular_function	proton transmembrane transporter activity
X	0015986	biological_process	proton motive force-driven ATP synthesis
X	0016020	cellular_component	membrane
X	0033177	cellular_component	proton-transporting two-sector ATPase complex, proton-transporting domain
X	0045263	cellular_component	proton-transporting ATP synthase complex, coupling factor F(o)
X	0046933	molecular_function	proton-transporting ATP synthase activity, rotational mechanism
X	1902600	biological_process	proton transmembrane transport
Y	0006754	biological_process	ATP biosynthetic process
Y	0008289	molecular_function	lipid binding
Y	0009507	cellular_component	chloroplast
Y	0009535	cellular_component	chloroplast thylakoid membrane
Y	0009579	cellular_component	thylakoid
Y	0015078	molecular_function	proton transmembrane transporter activity
Y	0015986	biological_process	proton motive force-driven ATP synthesis
Y	0016020	cellular_component	membrane
Y	0033177	cellular_component	proton-transporting two-sector ATPase complex, proton-transporting domain
Y	0045263	cellular_component	proton-transporting ATP synthase complex, coupling factor F(o)
Y	0046933	molecular_function	proton-transporting ATP synthase activity, rotational mechanism
Y	1902600	biological_process	proton transmembrane transport
Z	0006754	biological_process	ATP biosynthetic process
Z	0008289	molecular_function	lipid binding
Z	0009507	cellular_component	chloroplast
Z	0009535	cellular_component	chloroplast thylakoid membrane
Z	0009579	cellular_component	thylakoid
Z	0015078	molecular_function	proton transmembrane transporter activity
Z	0015986	biological_process	proton motive force-driven ATP synthesis
Z	0016020	cellular_component	membrane
Z	0033177	cellular_component	proton-transporting two-sector ATPase complex, proton-transporting domain
Z	0045263	cellular_component	proton-transporting ATP synthase complex, coupling factor F(o)
Z	0046933	molecular_function	proton-transporting ATP synthase activity, rotational mechanism
Z	1902600	biological_process	proton transmembrane transport
a	0005886	cellular_component	plasma membrane
a	0006754	biological_process	ATP biosynthetic process
a	0009507	cellular_component	chloroplast
a	0009535	cellular_component	chloroplast thylakoid membrane
a	0009579	cellular_component	thylakoid
a	0015078	molecular_function	proton transmembrane transporter activity
a	0015986	biological_process	proton motive force-driven ATP synthesis
a	0016020	cellular_component	membrane
a	0045263	cellular_component	proton-transporting ATP synthase complex, coupling factor F(o)
a	0046933	molecular_function	proton-transporting ATP synthase activity, rotational mechanism
a	1902600	biological_process	proton transmembrane transport
d	0006754	biological_process	ATP biosynthetic process
d	0009507	cellular_component	chloroplast
d	0009535	cellular_component	chloroplast thylakoid membrane
d	0009579	cellular_component	thylakoid
d	0015986	biological_process	proton motive force-driven ATP synthesis
d	0016020	cellular_component	membrane
d	0045261	cellular_component	proton-transporting ATP synthase complex, catalytic core F(1)
d	0046933	molecular_function	proton-transporting ATP synthase activity, rotational mechanism
d	1902600	biological_process	proton transmembrane transport
e	0005524	molecular_function	ATP binding
e	0006754	biological_process	ATP biosynthetic process
e	0009507	cellular_component	chloroplast
e	0009535	cellular_component	chloroplast thylakoid membrane
e	0009579	cellular_component	thylakoid
e	0015986	biological_process	proton motive force-driven ATP synthesis
e	0016020	cellular_component	membrane
e	0045261	cellular_component	proton-transporting ATP synthase complex, catalytic core F(1)
e	0046933	molecular_function	proton-transporting ATP synthase activity, rotational mechanism
e	1902600	biological_process	proton transmembrane transport
g	0006754	biological_process	ATP biosynthetic process
g	0009507	cellular_component	chloroplast
g	0009535	cellular_component	chloroplast thylakoid membrane
g	0009579	cellular_component	thylakoid
g	0015986	biological_process	proton motive force-driven ATP synthesis
g	0016020	cellular_component	membrane
g	0045261	cellular_component	proton-transporting ATP synthase complex, catalytic core F(1)
g	0046933	molecular_function	proton-transporting ATP synthase activity, rotational mechanism
g	1902600	biological_process	proton transmembrane transport

Functional Information from PDB Data

site_id	AC1
Number of Residues	16
Details	binding site for residue ATP A 600

Chain	Residue
A	GLN173
A	GLN423
A	GLN425
D	SER372
D	THR373
D	LEU375
D	GLN376
D	TYR385
A	THR174
A	GLY175
A	LYS176
A	THR177
A	ALA178
A	GLN201
A	PHE350
A	ARG355

site_id	AC2
Number of Residues	12
Details	binding site for residue ATP B 600

Chain	Residue
B	GLN173
B	THR174
B	GLY175
B	LYS176
B	THR177
B	ALA178
B	GLN201
B	PHE350
B	ARG355
B	GLN425
E	GLN376
E	ARG378

site_id	AC3
Number of Residues	15
Details	binding site for residue ATP C 600

Chain	Residue
C	GLN173
C	THR174
C	GLY175
C	LYS176
C	THR177
C	ALA178
C	PHE350
C	ARG355
C	GLN423
C	PRO424
C	GLN425
F	SER372
F	THR373
F	LEU375
F	TYR385

site_id	AC4
Number of Residues	11
Details	binding site for residue ADP D 600

Chain	Residue
B	VAL364
B	ARG366
D	GLY175
D	VAL176
D	GLY177
D	LYS178
D	THR179
D	VAL180
D	ARG205
D	TYR362
D	PHE441

site_id	AC5
Number of Residues	14
Details	binding site for residue ADP F 600

Chain	Residue
A	SER365
A	ARG366
F	ALA174
F	GLY175
F	GLY177
F	THR179
F	VAL180
F	ARG205
F	GLU208
F	TYR362
F	PHE435
F	ALA438
F	PHE441
F	THR442

Functional Information from PROSITE/UniProt

site_id	PS00152
Number of Residues	10
Details	ATPASE_ALPHA_BETA ATP synthase alpha and beta subunits signature. PAINVGISVS

Chain	Residue	Details
A	PRO356-SER365
D	PRO363-SER372

site_id	PS00153
Number of Residues	14
Details	ATPASE_GAMMA ATP synthase gamma subunit signature. ITgEilEivaGAnA

Chain	Residue	Details
g	ILE349-ALA362

site_id	PS00389
Number of Residues	20
Details	ATPASE_DELTA ATP synthase delta (OSCP) subunit signature. VrIktvIDpSLvAGFTIRyG

Chain	Residue	Details
d	VAL207-GLY226

site_id	PS00449
Number of Residues	10
Details	ATPASE_A ATP synthase a subunit signature. SLSFRLFGNI

Chain	Residue	Details
a	SER185-ILE194

site_id	PS00605
Number of Residues	22
Details	ATPASE_C ATP synthase c subunit signature. ARQPeaegkIrGtlLLslaFmE

Chain	Residue	Details
Z	ALA40-GLU61

Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI1
Number of Residues	560
Details	TRANSMEM: Helical => ECO:0000255\|HAMAP-Rule:MF_01396

Chain	Residue	Details
Z	PRO3-GLY23
V	LEU57-ALA77
U	PRO3-GLY23
U	LEU57-ALA77
T	PRO3-GLY23
T	LEU57-ALA77
S	PRO3-GLY23
S	LEU57-ALA77
P	PRO3-GLY23
P	LEU57-ALA77
O	PRO3-GLY23
Z	LEU57-ALA77
O	LEU57-ALA77
N	PRO3-GLY23
N	LEU57-ALA77
M	PRO3-GLY23
M	LEU57-ALA77
Q	PRO3-GLY23
Q	LEU57-ALA77
R	PRO3-GLY23
R	LEU57-ALA77
Y	PRO3-GLY23
Y	LEU57-ALA77
X	PRO3-GLY23
X	LEU57-ALA77
W	PRO3-GLY23
W	LEU57-ALA77
V	PRO3-GLY23

site_id	SWS_FT_FI2
Number of Residues	14
Details	SITE: Reversibly protonated during proton transport => ECO:0000255\|HAMAP-Rule:MF_01396

Chain	Residue	Details
Z	GLU61
O	GLU61
N	GLU61
M	GLU61
Q	GLU61
R	GLU61
Y	GLU61
X	GLU61
W	GLU61
V	GLU61
U	GLU61
T	GLU61
S	GLU61
P	GLU61

site_id	SWS_FT_FI3
Number of Residues	14
Details	MOD_RES: N-formylmethionine => ECO:0000269\|Ref.1

Chain	Residue	Details
Z	MET1
O	MET1
N	MET1
M	MET1
Q	MET1
R	MET1
Y	MET1
X	MET1
W	MET1
V	MET1
U	MET1
T	MET1
S	MET1
P	MET1

		Sequence (fasta)
		PDBx/mmCIF
		PDBML format (no-atom)
		PDB format (full)
		Validation report (PDF)