Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

6VKQ

Crystal Structure of human PARP-1 CAT domain bound to inhibitor EB-47

Functional Information from GO Data
ChainGOidnamespacecontents
A0003950molecular_functionNAD+ poly-ADP-ribosyltransferase activity
B0003950molecular_functionNAD+ poly-ADP-ribosyltransferase activity
C0003950molecular_functionNAD+ poly-ADP-ribosyltransferase activity
D0003950molecular_functionNAD+ poly-ADP-ribosyltransferase activity
Functional Information from PDB Data
site_idAC1
Number of Residues18
Detailsbinding site for residue UHB A 2001
ChainResidue
AASP766
AGLY876
ALEU877
AARG878
ATYR889
ATYR896
APHE897
ASER904
ATYR907
AGLU988
ALEU769
AASP770
AHIS862
AGLY863
ASER864
AASN868
AILE872
AGLN875

site_idAC2
Number of Residues4
Detailsbinding site for residue SO4 A 2002
ChainResidue
ALYS903
ALEU985
ATYR986
AGLU988

site_idAC3
Number of Residues2
Detailsbinding site for residue SO4 A 2003
ChainResidue
AARG858
AMET929

site_idAC4
Number of Residues6
Detailsbinding site for residue SO4 A 2004
ChainResidue
ALYS838
AGLN846
ALYS849
AASP965
ALYS1000
BLYS943

site_idAC5
Number of Residues17
Detailsbinding site for residue UHB B 2001
ChainResidue
BASP766
BLEU769
BASP770
BHIS862
BGLY863
BSER864
BASN868
BILE872
BGLN875
BGLY876
BLEU877
BARG878
BTYR889
BTYR896
BSER904
BTYR907
BGLU988

site_idAC6
Number of Residues4
Detailsbinding site for residue SO4 B 2002
ChainResidue
BLYS903
BLEU985
BTYR986
BGLU988

site_idAC7
Number of Residues2
Detailsbinding site for residue SO4 B 2003
ChainResidue
BARG858
BLYS949

site_idAC8
Number of Residues3
Detailsbinding site for residue SO4 B 2004
ChainResidue
ALYS943
BGLN846
BLYS849

site_idAC9
Number of Residues15
Detailsbinding site for residue UHB C 2001
ChainResidue
CASP766
CLEU769
CHIS862
CGLY863
CSER864
CASN868
CILE872
CGLY876
CLEU877
CARG878
CTYR889
CTYR896
CSER904
CTYR907
CGLU988

site_idAD1
Number of Residues4
Detailsbinding site for residue SO4 C 2002
ChainResidue
CLYS903
CLEU985
CTYR986
CGLU988

site_idAD2
Number of Residues2
Detailsbinding site for residue SO4 C 2003
ChainResidue
CARG858
CLYS949

site_idAD3
Number of Residues2
Detailsbinding site for residue SO4 C 2004
ChainResidue
CGLN846
CLYS849

site_idAD4
Number of Residues14
Detailsbinding site for residue UHB D 2001
ChainResidue
DASP766
DLEU769
DHIS862
DGLY863
DSER864
DASN868
DILE872
DGLY876
DARG878
DTYR889
DTYR896
DSER904
DTYR907
DGLU988

site_idAD5
Number of Residues4
Detailsbinding site for residue SO4 D 2002
ChainResidue
DLYS903
DLEU985
DTYR986
DGLU988

site_idAD6
Number of Residues3
Detailsbinding site for residue SO4 D 2003
ChainResidue
DLYS949
DARG858
DMET929

site_idAD7
Number of Residues1
Detailsbinding site for residue SO4 D 2004
ChainResidue
DLYS849

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues4
DetailsActive site: {"description":"For poly [ADP-ribose] polymerase activity","evidences":[{"source":"PubMed","id":"32028527","evidenceCode":"ECO:0000305"},{"source":"PubMed","id":"7852410","evidenceCode":"ECO:0000305"},{"source":"PubMed","id":"9315851","evidenceCode":"ECO:0000305"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues20
DetailsBinding site: {"evidences":[{"source":"UniProtKB","id":"Q9UGN5","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues8
DetailsCross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2); alternate","evidences":[{"source":"PubMed","id":"25218447","evidenceCode":"ECO:0007744"},{"source":"PubMed","id":"28112733","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

247947

PDB entries from 2026-01-21

PDB statisticsPDBj update infoContact PDBjnumon