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6VKE

Crystal Structure of Inhibitor JNJ-40012665 in Complex with Prefusion RSV F Glycoprotein

Functional Information from GO Data
ChainGOidnamespacecontents
F0019064biological_processfusion of virus membrane with host plasma membrane
Functional Information from PDB Data
site_idAC1
Number of Residues9
Detailsbinding site for residue NHE F 601
ChainResidue
FPHE387
FPHE477
FTYR478
FASP479
FASN496
FLEU503
FHOH717
FHOH767
FHOH842

site_idAC2
Number of Residues11
Detailsbinding site for residue R0S F 602
ChainResidue
FPHE137
FPHE140
FPHE140
FTHR397
FASP486
FPHE488
FPHE488
FPHE488
FASP489
FSO4608
FSO4608

site_idAC3
Number of Residues2
Detailsbinding site for residue CL F 603
ChainResidue
FLYS315
FTRP341

site_idAC4
Number of Residues2
Detailsbinding site for residue CL F 604
ChainResidue
FGLN462
FHOH778

site_idAC5
Number of Residues3
Detailsbinding site for residue SO4 F 605
ChainResidue
FASN276
FASN277
FARG364

site_idAC6
Number of Residues9
Detailsbinding site for residue SO4 F 606
ChainResidue
FSER443
FLYS445
FGLY464
FLYS465
FSER466
FHOH705
FHOH736
FHOH799
FHOH861

site_idAC7
Number of Residues4
Detailsbinding site for residue SO4 F 607
ChainResidue
FASN444
FLYS445
FGLY446
FLYS461

site_idAC8
Number of Residues7
Detailsbinding site for residue SO4 F 608
ChainResidue
FPHE137
FLEU138
FGLY139
FGLN354
FR0S602
FR0S602
FHOH721

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues20
DetailsRegion: {"description":"Fusion peptide","evidences":[{"source":"UniProtKB","id":"P11209","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues20
DetailsCoiled coil: {"evidences":[{"source":"PubMed","id":"10846072","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"29212939","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues1
DetailsGlycosylation: {"description":"N-linked (GlcNAc...) asparagine; by host","evidences":[{"source":"PubMed","id":"21586636","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

247536

PDB entries from 2026-01-14

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