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6VK1

CryoEM structure of Hrd1/Hrd3 part from Hrd1-Usa1/Der1/Hrd3 complex

Functional Information from GO Data
ChainGOidnamespacecontents
B0000836cellular_componentHrd1p ubiquitin ligase complex
B0016567biological_processprotein ubiquitination
B0030433biological_processubiquitin-dependent ERAD pathway
B0061630molecular_functionubiquitin protein ligase activity
Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues5
DetailsCARBOHYD: N-linked (GlcNAc...) asparagine => ECO:0000255
ChainResidueDetails
AASN101
AASN123
AASN142
AASN429
AASN611

site_idSWS_FT_FI2
Number of Residues21
DetailsTRANSMEM: Helical; Name=1 => ECO:0000269|PubMed:32327568
ChainResidueDetails
BGLN9-LYS30

site_idSWS_FT_FI3
Number of Residues29
DetailsTOPO_DOM: Lumenal => ECO:0000269|PubMed:32327568
ChainResidueDetails
BTHR31-ASN43
BGLU102-ARG103
BSER170-THR183
BPHE293-PRO296

site_idSWS_FT_FI4
Number of Residues27
DetailsTRANSMEM: Helical; Name=2 => ECO:0000269|PubMed:32327568
ChainResidueDetails
BGLU44-PHE71

site_idSWS_FT_FI5
Number of Residues16
DetailsTRANSMEM: Helical; Name=3 => ECO:0000269|PubMed:32327568
ChainResidueDetails
BARG85-HIS101

site_idSWS_FT_FI6
Number of Residues22
DetailsTRANSMEM: Helical; Name=4 => ECO:0000269|PubMed:32327568
ChainResidueDetails
BTYR104-LYS126

site_idSWS_FT_FI7
Number of Residues21
DetailsTRANSMEM: Helical; Name=5 => ECO:0000269|PubMed:32327568
ChainResidueDetails
BSER148-ILE169

site_idSWS_FT_FI8
Number of Residues24
DetailsTRANSMEM: Helical; Name=6 => ECO:0000269|PubMed:32327568
ChainResidueDetails
BSER184-CYS208

site_idSWS_FT_FI9
Number of Residues20
DetailsTRANSMEM: Helical; Name=7 => ECO:0000269|PubMed:32327568
ChainResidueDetails
BLYS272-PRO292

site_idSWS_FT_FI10
Number of Residues17
DetailsTRANSMEM: Helical; Name=8 => ECO:0000269|PubMed:32327568
ChainResidueDetails
BMET297-GLY314

site_idSWS_FT_FI11
Number of Residues51
DetailsZN_FING: RING-type; atypical => ECO:0000255|PROSITE-ProRule:PRU00175
ChainResidueDetails
BCYS349-ARG400

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PDB entries from 2024-04-24

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