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6VF6

DNA Polymerase Mu, 8-oxorGTP:At Product State Ternary Complex, 50 mM Mn2+ (960 min)

Functional Information from GO Data
ChainGOidnamespacecontents
A0003677molecular_functionDNA binding
A0003887molecular_functionDNA-directed DNA polymerase activity
A0005634cellular_componentnucleus
A0006281biological_processDNA repair
A0016779molecular_functionnucleotidyltransferase activity
A0034061molecular_functionDNA polymerase activity
Functional Information from PDB Data
site_idAC1
Number of Residues1
Detailsbinding site for residue DTT A 501
ChainResidue
ACYS180

site_idAC2
Number of Residues8
Detailsbinding site for residue EDO A 502
ChainResidue
AARG387
AGLY433
ATRP434
AARG445
ASER458
AHOH655
PDA4
P8GM5

site_idAC3
Number of Residues4
Detailsbinding site for residue EDO A 503
ChainResidue
AHIS152
ATHR314
APHE427
AHOH685

site_idAC4
Number of Residues8
Detailsbinding site for residue MN A 504
ChainResidue
AASP330
AASP332
AASP418
AMN505
AHOH752
PDA4
P8GM5
PHOH105

site_idAC5
Number of Residues6
Detailsbinding site for residue MN A 505
ChainResidue
AASP330
AASP332
AMN504
AGOA512
AHOH691
P8GM5

site_idAC6
Number of Residues3
Detailsbinding site for residue MN A 506
ChainResidue
AHIS152
AHOH616
AHOH784

site_idAC7
Number of Residues5
Detailsbinding site for residue MN A 507
ChainResidue
AHIS208
DDG1
DHOH213
DHOH214
DHOH215

site_idAC8
Number of Residues2
Detailsbinding site for residue MN A 508
ChainResidue
AHIS219
AHOH746

site_idAC9
Number of Residues5
Detailsbinding site for residue MN A 509
ChainResidue
AGLU386
AHIS459
AHOH727
AHOH792
THOH209

site_idAD1
Number of Residues6
Detailsbinding site for residue NA A 510
ChainResidue
ATHR241
AILE243
AVAL246
AHOH790
PDT3
PHOH114

site_idAD2
Number of Residues4
Detailsbinding site for residue EPE A 511
ChainResidue
ALYS325
ALEU326
AGLN327
AHOH735

site_idAD3
Number of Residues10
Detailsbinding site for residue GOA A 512
ChainResidue
AGLY319
AGLY320
AARG323
AASP330
AASP332
AMN505
AHOH691
AHOH769
P8GM5
PHOH102

site_idAD4
Number of Residues4
Detailsbinding site for residue MN T 101
ChainResidue
TDG2
THOH205
THOH219
THOH233

site_idAD5
Number of Residues3
Detailsbinding site for residue MN D 101
ChainResidue
DDG1
DHOH205
DHOH211

Functional Information from PROSITE/UniProt
site_idPS00522
Number of Residues20
DetailsDNA_POLYMERASE_X DNA polymerase family X signature. GGFrRGklqGhDVDFLIthP
ChainResidueDetails
AGLY319-PRO338

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues3
DetailsBINDING: BINDING => ECO:0000250
ChainResidueDetails
AASP330
AASP332
AALA430

site_idSWS_FT_FI2
Number of Residues1
DetailsSITE: Responsible for the low discrimination between dNTP and rNTP
ChainResidueDetails
AARG445

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PDB entries from 2024-07-17

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