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6VF3

DNA Polymerase Mu, 8-oxorGTP:At Ground State Ternary Complex, 50 mM Mn2+ (15 min)

Functional Information from GO Data
ChainGOidnamespacecontents
A0003677molecular_functionDNA binding
A0003887molecular_functionDNA-directed DNA polymerase activity
A0005634cellular_componentnucleus
A0006281biological_processDNA repair
A0016779molecular_functionnucleotidyltransferase activity
A0034061molecular_functionDNA polymerase activity
Functional Information from PDB Data
site_idAC1
Number of Residues7
Detailsbinding site for residue EDO A 501
ChainResidue
AARG387
AGLY433
ATRP434
AARG445
AEDO502
A8GT506
PDA4

site_idAC2
Number of Residues8
Detailsbinding site for residue EDO A 502
ChainResidue
AASN457
ASER458
AHIS459
AEDO501
TDT6
TDA7
AARG387
AARG445

site_idAC3
Number of Residues5
Detailsbinding site for residue EDO A 503
ChainResidue
AARG253
AARG256
AGLU451
ALYS452
AHOH676

site_idAC4
Number of Residues6
Detailsbinding site for residue NA A 504
ChainResidue
ATHR241
AILE243
AVAL246
PDT3
PHOH104
PHOH113

site_idAC5
Number of Residues3
Detailsbinding site for residue EPE A 505
ChainResidue
ALYS325
ALEU326
AGLN327

site_idAC6
Number of Residues24
Detailsbinding site for residue 8GT A 506
ChainResidue
AGLY319
AGLY320
AARG323
ALYS325
AGLY328
AHIS329
AASP330
AASP332
AGLY433
ATRP434
AGLY436
ALYS438
AGLN441
AEDO501
AMN507
AMN508
AHOH646
AHOH692
AHOH711
AHOH726
AHOH742
PDA4
PHOH101
TDA5

site_idAC7
Number of Residues5
Detailsbinding site for residue MN A 507
ChainResidue
AASP330
AASP332
A8GT506
AMN508
AHOH692

site_idAC8
Number of Residues8
Detailsbinding site for residue MN A 508
ChainResidue
AASP330
AASP332
AASP418
A8GT506
AMN507
AHOH711
PDA4
PHOH101

site_idAC9
Number of Residues2
Detailsbinding site for residue MN A 509
ChainResidue
AGLU218
AHIS219

site_idAD1
Number of Residues5
Detailsbinding site for residue MN A 510
ChainResidue
AGLU386
AHIS459
AHOH795
AHOH819
THOH205

site_idAD2
Number of Residues3
Detailsbinding site for residue MN A 511
ChainResidue
AHIS208
DDG1
DHOH215

site_idAD3
Number of Residues3
Detailsbinding site for residue MN A 512
ChainResidue
AHIS152
AHOH607
AHOH802

site_idAD4
Number of Residues1
Detailsbinding site for residue DTT A 513
ChainResidue
ACYS180

site_idAD5
Number of Residues3
Detailsbinding site for residue MN T 101
ChainResidue
TDG2
THOH201
THOH210

site_idAD6
Number of Residues3
Detailsbinding site for residue MN D 101
ChainResidue
DDG1
DHOH206
DHOH216

Functional Information from PROSITE/UniProt
site_idPS00522
Number of Residues20
DetailsDNA_POLYMERASE_X DNA polymerase family X signature. GGFrRGklqGhDVDFLIthP
ChainResidueDetails
AGLY319-PRO338

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues3
DetailsBINDING: BINDING => ECO:0000250
ChainResidueDetails
AASP330
AASP332
AALA430

site_idSWS_FT_FI2
Number of Residues1
DetailsSITE: Responsible for the low discrimination between dNTP and rNTP
ChainResidueDetails
AARG445

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PDB entries from 2024-10-30

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