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6VEZ

DNA Polymerase Mu, 8-oxorGTP:At Pre-Catalytic Ternary Complex, 20 mM Ca2+ (60 min)

Functional Information from GO Data
ChainGOidnamespacecontents
A0003677molecular_functionDNA binding
A0003887molecular_functionDNA-directed DNA polymerase activity
A0005634cellular_componentnucleus
A0006281biological_processDNA repair
A0016779molecular_functionnucleotidyltransferase activity
A0034061molecular_functionDNA polymerase activity
Functional Information from PDB Data
site_idAC1
Number of Residues20
Detailsbinding site for residue 8GT A 501
ChainResidue
AGLY320
ALYS438
AGLN441
ACA502
ACA503
AEDO508
AHOH622
AHOH737
AHOH752
PDA4
PHOH101
AARG323
TDA5
ALYS325
AHIS329
AASP330
AASP332
AGLY433
ATRP434
AGLY436

site_idAC2
Number of Residues4
Detailsbinding site for residue CA A 502
ChainResidue
AASP330
AASP332
A8GT501
AHOH737

site_idAC3
Number of Residues6
Detailsbinding site for residue CA A 503
ChainResidue
AASP330
AASP332
AASP418
A8GT501
PDA4
PHOH101

site_idAC4
Number of Residues5
Detailsbinding site for residue CA A 504
ChainResidue
APHE205
AHOH656
AHOH818
DHOH104
DHOH114

site_idAC5
Number of Residues6
Detailsbinding site for residue NA A 505
ChainResidue
ATHR241
AILE243
AVAL246
AHOH816
PDT3
PHOH114

site_idAC6
Number of Residues1
Detailsbinding site for residue DTT A 506
ChainResidue
ACYS180

site_idAC7
Number of Residues4
Detailsbinding site for residue EPE A 507
ChainResidue
ALYS325
ALEU326
AGLN327
AHOH637

site_idAC8
Number of Residues7
Detailsbinding site for residue EDO A 508
ChainResidue
AARG387
AGLY433
ATRP434
AARG445
A8GT501
AEDO509
PDA4

site_idAC9
Number of Residues7
Detailsbinding site for residue EDO A 509
ChainResidue
AARG387
AARG445
AASN457
ASER458
AEDO508
TDT6
TDA7

site_idAD1
Number of Residues4
Detailsbinding site for residue EDO A 510
ChainResidue
AGLN144
AGLY483
AHOH690
AHOH707

Functional Information from PROSITE/UniProt
site_idPS00522
Number of Residues20
DetailsDNA_POLYMERASE_X DNA polymerase family X signature. GGFrRGklqGhDVDFLIthP
ChainResidueDetails
AGLY319-PRO338

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues3
DetailsBINDING: BINDING => ECO:0000250
ChainResidueDetails
AASP330
AASP332
AALA430

site_idSWS_FT_FI2
Number of Residues1
DetailsSITE: Responsible for the low discrimination between dNTP and rNTP
ChainResidueDetails
AARG445

224004

PDB entries from 2024-08-21

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