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6VDX

Crystal Structure of Dehaloperoxidase B in Complex with cofactor Manganese(III)- Porphyrin and Substrate Trichlorophenol

Functional Information from GO Data
ChainGOidnamespacecontents
A0004601molecular_functionperoxidase activity
A0005344molecular_functionoxygen carrier activity
A0015671biological_processoxygen transport
A0019825molecular_functionoxygen binding
A0020037molecular_functionheme binding
A0046872molecular_functionmetal ion binding
A0098869biological_processcellular oxidant detoxification
B0004601molecular_functionperoxidase activity
B0005344molecular_functionoxygen carrier activity
B0015671biological_processoxygen transport
B0019825molecular_functionoxygen binding
B0020037molecular_functionheme binding
B0046872molecular_functionmetal ion binding
B0098869biological_processcellular oxidant detoxification
Functional Information from PDB Data
site_idAC1
Number of Residues6
Detailsbinding site for residue EDO A 302
ChainResidue
AGLN4
AASP5
ATHR8
ASER114
AHOH407
BHOH411

site_idAC2
Number of Residues9
Detailsbinding site for residue PEG A 303
ChainResidue
ALYS99
ALYS137
BTHR93
BGLY95
BGLU98
BLYS99
ATHR93
ATHR94
AGLY95

site_idAC3
Number of Residues8
Detailsbinding site for residue EDO A 304
ChainResidue
AVAL74
APRO75
AASN126
ASER129
AALA130
AHOH428
AHOH451
BTHR71

site_idAC4
Number of Residues9
Detailsbinding site for residue SO4 A 306
ChainResidue
ALYS32
AVAL39
AGLY40
AHOH444
BGLY1
BPHE2
BLYS3
BHOH465
BHOH475

site_idAC5
Number of Residues9
Detailsbinding site for residue SO4 A 307
ChainResidue
AGLN44
ALEU62
AGLU65
AARG69
AHOH402
AHOH408
AHOH458
AHOH476
BALA7

site_idAC6
Number of Residues5
Detailsbinding site for residue EDO B 302
ChainResidue
AHOH416
BASP5
BTHR8
BSER114
BHOH437

site_idAC7
Number of Residues7
Detailsbinding site for residue EDO B 303
ChainResidue
AALA7
BGLN44
BLEU62
BGLU65
BARG69
BHOH442
BHOH446

site_idAC8
Number of Residues9
Detailsbinding site for residue SO4 B 305
ChainResidue
AGLY1
APHE2
ALYS3
AHOH429
AHOH462
AHOH465
BLYS32
BVAL39
BGLY40

site_idAC9
Number of Residues19
Detailsbinding site for residues T6C A 301 and MNR A 305
ChainResidue
APHE21
APHE24
AGLU31
AASN34
APHE35
ATYR38
AHIS55
ATHR56
ALYS58
AVAL59
AMET63
ALEU83
AMET86
AGLN88
AHIS89
ALEU92
AASN96
APHE97
ALEU127

site_idAD1
Number of Residues19
Detailsbinding site for residues T6C A 301 and MNR A 305
ChainResidue
ALEU127
APHE21
APHE24
AGLU31
AASN34
APHE35
ATYR38
AHIS55
ATHR56
ALYS58
AVAL59
AMET63
ALEU83
AMET86
AGLN88
AHIS89
ALEU92
AASN96
APHE97

site_idAD2
Number of Residues19
Detailsbinding site for residues T6C B 301 and MNR B 304
ChainResidue
BPHE21
BPHE24
BGLU31
BASN34
BPHE35
BTYR38
BHIS55
BTHR56
BLYS58
BVAL59
BMET63
BMET86
BGLN88
BHIS89
BLEU92
BASN96
BPHE97
BHOH402
BHOH413

site_idAD3
Number of Residues19
Detailsbinding site for residues T6C B 301 and MNR B 304
ChainResidue
BPHE21
BPHE24
BGLU31
BASN34
BPHE35
BTYR38
BHIS55
BTHR56
BLYS58
BVAL59
BMET63
BMET86
BGLN88
BHIS89
BLEU92
BASN96
BPHE97
BHOH402
BHOH413

site_idAD4
Number of Residues19
Detailsbinding site for residues T6C B 301 and MNR B 304
ChainResidue
BPHE21
BPHE24
BGLU31
BASN34
BPHE35
BTYR38
BHIS55
BTHR56
BLYS58
BVAL59
BMET63
BMET86
BGLN88
BHIS89
BLEU92
BASN96
BPHE97
BHOH402
BHOH413

site_idAD5
Number of Residues19
Detailsbinding site for residues T6C B 301 and MNR B 304
ChainResidue
BPHE21
BPHE24
BGLU31
BASN34
BPHE35
BTYR38
BHIS55
BTHR56
BLYS58
BVAL59
BMET63
BMET86
BGLN88
BHIS89
BLEU92
BASN96
BPHE97
BHOH402
BHOH413

221051

PDB entries from 2024-06-12

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