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6VCX

Crystal structure of Arabidopsis thaliana S-adenosylmethionine Synthase 1 (AtMAT1)

Functional Information from GO Data
ChainGOidnamespacecontents
A0004478molecular_functionmethionine adenosyltransferase activity
A0005515molecular_functionprotein binding
A0005524molecular_functionATP binding
A0005576cellular_componentextracellular region
A0005737cellular_componentcytoplasm
A0005829cellular_componentcytosol
A0006556biological_processS-adenosylmethionine biosynthetic process
A0006730biological_processone-carbon metabolic process
A0009505cellular_componentplant-type cell wall
A0009693biological_processethylene biosynthetic process
A0016740molecular_functiontransferase activity
A0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues13
Detailsbinding site for residue SO4 A 401
ChainResidue
AASP17
AHOH590
AHOH602
AHOH646
AHOH811
AARG252
ALYS253
AALA269
ALYS273
AASP279
ASO4403
AMG404
AHOH502

site_idAC2
Number of Residues4
Detailsbinding site for residue SO4 A 402
ChainResidue
APRO220
AGLU221
AHOH535
AHOH748

site_idAC3
Number of Residues10
Detailsbinding site for residue SO4 A 403
ChainResidue
AHIS15
AASP17
AASP122
ALYS169
ALYS253
ASO4401
AMG404
AHOH502
AHOH506
AHOH602

site_idAC4
Number of Residues7
Detailsbinding site for residue MG A 404
ChainResidue
AASP17
ASO4401
ASO4403
AHOH502
AHOH590
AHOH595
AHOH811

site_idAC5
Number of Residues6
Detailsbinding site for residue MG A 405
ChainResidue
AASP64
AHOH607
AHOH797
AHOH853
AHOH902
AHOH997

site_idAC6
Number of Residues4
Detailsbinding site for residue CL A 406
ChainResidue
AARG237
AVAL239
AILE240
AHOH761

site_idAC7
Number of Residues3
Detailsbinding site for residue CL A 407
ChainResidue
AASP342
ALYS384
AHOH908

site_idAC8
Number of Residues6
Detailsbinding site for residue CL A 408
ChainResidue
AGLY121
AASP122
ALYS277
AVAL278
AHOH825
AHOH940

site_idAC9
Number of Residues5
Detailsbinding site for residue CL A 409
ChainResidue
AARG70
ALYS91
AVAL92
AHOH784
AHOH833

site_idAD1
Number of Residues2
Detailsbinding site for residue CL A 410
ChainResidue
AASP198
AGLU199

site_idAD2
Number of Residues2
Detailsbinding site for residue CL A 411
ChainResidue
ALYS113
AGLY119

site_idAD3
Number of Residues4
Detailsbinding site for residue CL A 412
ChainResidue
AVAL318
ALYS338
AHOH832
AHOH996

site_idAD4
Number of Residues3
Detailsbinding site for residue CL A 413
ChainResidue
APRO101
AASP102
AVAL107

site_idAD5
Number of Residues14
Detailsbinding site for residue BTB A 414
ChainResidue
AGLU13
AGLN22
ALYS157
ALEU363
ALYS364
AHOH501
AHOH515
AHOH520
AHOH531
AHOH632
AHOH679
AHOH779
AHOH791
AHOH829

Functional Information from PROSITE/UniProt
site_idPS00376
Number of Residues11
DetailsADOMET_SYNTHASE_1 S-adenosylmethionine synthase signature 1. GAGDQGhmfGY
ChainResidueDetails
AGLY119-TYR129

site_idPS00377
Number of Residues9
DetailsADOMET_SYNTHASE_2 S-adenosylmethionine synthase signature 2. GGGAFSgKD
ChainResidueDetails
AGLY266-ASP274

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsBINDING: BINDING => ECO:0000250|UniProtKB:P13444
ChainResidueDetails
AGLU9

site_idSWS_FT_FI2
Number of Residues3
DetailsBINDING: in other chain => ECO:0000250|UniProtKB:Q00266
ChainResidueDetails
AASP167
ASER235
AHIS15

site_idSWS_FT_FI3
Number of Residues4
DetailsBINDING: BINDING => ECO:0000250|UniProtKB:P0A817
ChainResidueDetails
AASP246
AALA269
ALYS273
AGLU43

site_idSWS_FT_FI4
Number of Residues4
DetailsBINDING: in other chain => ECO:0000250|UniProtKB:P0A817
ChainResidueDetails
AGLN99
AARG252
ALYS277
AGLU56

site_idSWS_FT_FI5
Number of Residues1
DetailsMOD_RES: S-nitrosocysteine => ECO:0000269|PubMed:16365035
ChainResidueDetails
ACYS114

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PDB entries from 2024-06-12

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