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6VCR

Crystal structure of E.coli RppH in complex with CTP

Functional Information from GO Data
ChainGOidnamespacecontents
A0000287molecular_functionmagnesium ion binding
A0005515molecular_functionprotein binding
A0005737cellular_componentcytoplasm
A0006402biological_processmRNA catabolic process
A0008033biological_processtRNA processing
A0016462molecular_functionpyrophosphatase activity
A0016787molecular_functionhydrolase activity
A0016818molecular_functionhydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
A0034353molecular_functionmRNA 5'-diphosphatase activity
A0050779biological_processRNA destabilization
A0110153molecular_functionRNA NAD-cap (NMN-forming) hydrolase activity
A0110154biological_processRNA decapping
A0110155biological_processNAD-cap decapping
Functional Information from PDB Data
site_idAC1
Number of Residues17
Detailsbinding site for residue CTP A 201
ChainResidue
AARG27
AHOH330
AHOH337
AHOH355
AHOH362
AHOH372
AHOH402
AHOH406
AHOH433
AGLN30
ASER32
AGLN37
ATYR77
ALEU79
AGLN95
ALYS140
AHOH307

site_idAC2
Number of Residues8
Detailsbinding site for residue CTP A 202
ChainResidue
ATRP74
AARG76
AARG141
AASP142
AARG146
ACTP203
AHOH303
AHOH373

site_idAC3
Number of Residues8
Detailsbinding site for residue CTP A 203
ChainResidue
ATYR7
AARG76
ALYS78
AARG141
AASP142
AARG146
ACTP202
AHOH312

site_idAC4
Number of Residues6
Detailsbinding site for residue PPV A 204
ChainResidue
ASER45
AALA46
ATYR131
AGLN135
AHOH306
AHOH338

site_idAC5
Number of Residues5
Detailsbinding site for residue SO4 A 205
ChainResidue
ATHR71
AARG72
AASN73
AGLU150
AHOH327

Functional Information from PROSITE/UniProt
site_idPS00893
Number of Residues22
DetailsNUDIX_BOX Nudix box signature. GginpgEsaeqAMyRELfEEvG
ChainResidueDetails
AGLY38-GLY59

219140

PDB entries from 2024-05-01

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