6UR8
CryoEM structure of human alpha4beta2 nicotinic acetylcholine receptor in complex with varenicline
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0004888 | molecular_function | transmembrane signaling receptor activity |
A | 0005216 | molecular_function | monoatomic ion channel activity |
A | 0005230 | molecular_function | extracellular ligand-gated monoatomic ion channel activity |
A | 0005506 | molecular_function | iron ion binding |
A | 0006811 | biological_process | monoatomic ion transport |
A | 0009055 | molecular_function | electron transfer activity |
A | 0016020 | cellular_component | membrane |
A | 0020037 | molecular_function | heme binding |
A | 0022848 | molecular_function | acetylcholine-gated monoatomic cation-selective channel activity |
A | 0022900 | biological_process | electron transport chain |
A | 0034220 | biological_process | monoatomic ion transmembrane transport |
A | 0042597 | cellular_component | periplasmic space |
A | 0045211 | cellular_component | postsynaptic membrane |
A | 0046872 | molecular_function | metal ion binding |
B | 0004888 | molecular_function | transmembrane signaling receptor activity |
B | 0005216 | molecular_function | monoatomic ion channel activity |
B | 0005230 | molecular_function | extracellular ligand-gated monoatomic ion channel activity |
B | 0006811 | biological_process | monoatomic ion transport |
B | 0016020 | cellular_component | membrane |
B | 0022848 | molecular_function | acetylcholine-gated monoatomic cation-selective channel activity |
B | 0034220 | biological_process | monoatomic ion transmembrane transport |
B | 0045211 | cellular_component | postsynaptic membrane |
C | 0004888 | molecular_function | transmembrane signaling receptor activity |
C | 0005216 | molecular_function | monoatomic ion channel activity |
C | 0005230 | molecular_function | extracellular ligand-gated monoatomic ion channel activity |
C | 0006811 | biological_process | monoatomic ion transport |
C | 0016020 | cellular_component | membrane |
C | 0022848 | molecular_function | acetylcholine-gated monoatomic cation-selective channel activity |
C | 0034220 | biological_process | monoatomic ion transmembrane transport |
C | 0045211 | cellular_component | postsynaptic membrane |
D | 0004888 | molecular_function | transmembrane signaling receptor activity |
D | 0005216 | molecular_function | monoatomic ion channel activity |
D | 0005230 | molecular_function | extracellular ligand-gated monoatomic ion channel activity |
D | 0005506 | molecular_function | iron ion binding |
D | 0006811 | biological_process | monoatomic ion transport |
D | 0009055 | molecular_function | electron transfer activity |
D | 0016020 | cellular_component | membrane |
D | 0020037 | molecular_function | heme binding |
D | 0022848 | molecular_function | acetylcholine-gated monoatomic cation-selective channel activity |
D | 0022900 | biological_process | electron transport chain |
D | 0034220 | biological_process | monoatomic ion transmembrane transport |
D | 0042597 | cellular_component | periplasmic space |
D | 0045211 | cellular_component | postsynaptic membrane |
D | 0046872 | molecular_function | metal ion binding |
E | 0004888 | molecular_function | transmembrane signaling receptor activity |
E | 0005216 | molecular_function | monoatomic ion channel activity |
E | 0005230 | molecular_function | extracellular ligand-gated monoatomic ion channel activity |
E | 0006811 | biological_process | monoatomic ion transport |
E | 0016020 | cellular_component | membrane |
E | 0022848 | molecular_function | acetylcholine-gated monoatomic cation-selective channel activity |
E | 0034220 | biological_process | monoatomic ion transmembrane transport |
E | 0045211 | cellular_component | postsynaptic membrane |
Functional Information from PROSITE/UniProt
site_id | PS00236 |
Number of Residues | 15 |
Details | NEUROTR_ION_CHANNEL Neurotransmitter-gated ion-channels signature. CkIeVkhFPfDqqnC |
Chain | Residue | Details |
B | CYS130-CYS144 | |
A | CYS135-CYS149 |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 301 |
Details | Transmembrane: {"description":"Helical","evidences":[{"source":"PubMed","id":"29720657","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"6CNJ","evidenceCode":"ECO:0007744"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI2 |
Number of Residues | 93 |
Details | Transmembrane: {"description":"Helical","evidences":[{"evidenceCode":"ECO:0000255"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI3 |
Number of Residues | 2 |
Details | Binding site: {"evidences":[{"source":"PubMed","id":"38454578","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"8ST0","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"8ST1","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"8ST3","evidenceCode":"ECO:0007744"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI4 |
Number of Residues | 2 |
Details | Binding site: {"evidences":[{"source":"PubMed","id":"38454578","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"8ST0","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"8ST3","evidenceCode":"ECO:0007744"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI5 |
Number of Residues | 2 |
Details | Lipidation: {"description":"S-palmitoyl cysteine","evidences":[{"source":"UniProtKB","id":"P04757","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI6 |
Number of Residues | 7 |
Details | Glycosylation: {"description":"N-linked (GlcNAc...) asparagine","evidences":[{"evidenceCode":"ECO:0000255"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI7 |
Number of Residues | 5 |
Details | Glycosylation: {"description":"N-linked (GlcNAc...) asparagine","evidences":[{"source":"PubMed","id":"27698419","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"5KXI","evidenceCode":"ECO:0007744"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI8 |
Number of Residues | 12 |
Details | Topological domain: {"description":"Cytoplasmic","evidences":[{"source":"PubMed","id":"29720657","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"6CNJ","evidenceCode":"ECO:0007744"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI9 |
Number of Residues | 39 |
Details | Topological domain: {"description":"Extracellular","evidences":[{"source":"PubMed","id":"29720657","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"6CNJ","evidenceCode":"ECO:0007744"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI10 |
Number of Residues | 3 |
Details | Site: {"description":"Key residue that may interfere with effective access of the conotoxin BuIA to the channel binding site","evidences":[{"source":"UniProtKB","id":"P12390","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI11 |
Number of Residues | 6 |
Details | Site: {"description":"Key residue for a rapid dissociation (K(off)) from the conotoxin BuIA","evidences":[{"source":"UniProtKB","id":"P12390","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |