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6UOB

Crystal structure of Danio rerio histone deacetylase 6 catalytic domain 1 (CD1) K330L mutant complexed with Resminostat

Functional Information from GO Data
ChainGOidnamespacecontents
A0000118cellular_componenthistone deacetylase complex
A0004407molecular_functionhistone deacetylase activity
A0006325biological_processchromatin organization
A0016575biological_processhistone deacetylation
B0000118cellular_componenthistone deacetylase complex
B0004407molecular_functionhistone deacetylase activity
B0006325biological_processchromatin organization
B0016575biological_processhistone deacetylation
Functional Information from PDB Data
site_idAC1
Number of Residues3
Detailsbinding site for residue PHE A 501
ChainResidue
ATYR409
AGLN416
ATHR417

site_idAC2
Number of Residues4
Detailsbinding site for residue ZN A 502
ChainResidue
AASP230
AHIS232
AASP323
AP7D505

site_idAC3
Number of Residues5
Detailsbinding site for residue K A 503
ChainResidue
AHIS232
ASER251
AVAL252
AASP228
AASP230

site_idAC4
Number of Residues6
Detailsbinding site for residue K A 504
ChainResidue
APHE241
AASP244
AVAL247
ATYR280
AHOH661
AHOH665

site_idAC5
Number of Residues16
Detailsbinding site for residue P7D A 505
ChainResidue
APRO83
ASER150
AHIS192
AHIS193
APHE202
AASP230
AHIS232
ATRP261
AASP323
ATYR363
AZN502
AHOH642
BASP257
BGLY258
BSER259
BHIS263

site_idAC6
Number of Residues6
Detailsbinding site for residue EDO A 506
ChainResidue
ASER178
AARG354
AHOH608
AHOH640
AHOH707
BPRO383

site_idAC7
Number of Residues4
Detailsbinding site for residue ZN B 501
ChainResidue
BASP230
BHIS232
BASP323
BP7D504

site_idAC8
Number of Residues5
Detailsbinding site for residue K B 502
ChainResidue
BASP228
BASP230
BHIS232
BSER251
BVAL252

site_idAC9
Number of Residues6
Detailsbinding site for residue K B 503
ChainResidue
BPHE241
BASP244
BVAL247
BTYR280
BHOH623
BHOH669

site_idAD1
Number of Residues16
Detailsbinding site for residue P7D B 504
ChainResidue
AASP257
AGLY258
ASER259
AHIS263
BPRO83
BSER150
BHIS192
BHIS193
BPHE202
BASP230
BHIS232
BTRP261
BASP323
BTYR363
BZN501
BHOH611

site_idAD2
Number of Residues7
Detailsbinding site for residue EDO B 505
ChainResidue
BALA80
BSER81
BHIS82
BCYS85
BHOH607
BHOH664
BHOH666

site_idAD3
Number of Residues6
Detailsbinding site for residue EDO B 506
ChainResidue
BTRP78
BHIS82
BVAL151
BTYR152
BHOH601
BHOH732

221051

PDB entries from 2024-06-12

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