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6UO3

Crystal structure of Danio rerio histone deacetylase 6 catalytic domain 1 (CD1) complexed with AR-42

Functional Information from GO Data
ChainGOidnamespacecontents
A0000118cellular_componenthistone deacetylase complex
A0004407molecular_functionhistone deacetylase activity
A0006325biological_processchromatin organization
A0016575biological_processhistone deacetylation
Functional Information from PDB Data
site_idAC1
Number of Residues4
Detailsbinding site for residue ZN A 501
ChainResidue
AASP230
AHIS232
AASP323
AQCP504

site_idAC2
Number of Residues5
Detailsbinding site for residue K A 502
ChainResidue
AASP228
AASP230
AHIS232
ASER251
AVAL252

site_idAC3
Number of Residues5
Detailsbinding site for residue K A 503
ChainResidue
APHE241
AASP244
AVAL247
ATYR280
AHOH674

site_idAC4
Number of Residues17
Detailsbinding site for residue QCP A 504
ChainResidue
AHIS82
APRO83
AGLU94
ATHR98
ASER150
AHIS192
AHIS193
APHE202
AASP230
AHIS232
ATRP261
AASP323
ATYR363
AZN501
AEDO507
AHOH618
AHOH754

site_idAC5
Number of Residues10
Detailsbinding site for residue EDO A 505
ChainResidue
ACYS85
ATYR255
AASP257
AGLY258
AHIS263
ALEU264
ALYS265
AHOH690
AHOH798
AHOH854

site_idAC6
Number of Residues5
Detailsbinding site for residue EDO A 506
ChainResidue
AHIS345
ALYS348
ASER378
AGLY381
AASP382

site_idAC7
Number of Residues8
Detailsbinding site for residue EDO A 507
ChainResidue
AGLU94
AMET95
ATHR98
AQCP504
AHOH606
AHOH694
AHOH731
AHOH848

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PDB entries from 2024-09-04

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