6UL5

Crystal structure of HIV-1 reverse transcriptase (RT) in complex with 4-[(4-{4-[(E)-2-cyanoethenyl]-2,6-dimethylphenoxy}thieno[3,2-d]pyrimidin-2-yl)amino]-2-fluorobenzonitrile (24b), a non-nucleoside RT inhibitor

Functional Information from GO Data

Chain	GOid	namespace	contents
A	0003676	molecular_function	nucleic acid binding
A	0003964	molecular_function	RNA-directed DNA polymerase activity
A	0004523	molecular_function	RNA-DNA hybrid ribonuclease activity
A	0006278	biological_process	RNA-templated DNA biosynthetic process
B	0003964	molecular_function	RNA-directed DNA polymerase activity
B	0006278	biological_process	RNA-templated DNA biosynthetic process

Functional Information from PDB Data

site_id	AC1
Number of Residues	13
Details	binding site for residue QAG A 601

Chain	Residue
A	LEU100
A	PRO236
A	TYR318
B	GLU138
B	HOH647
A	LYS101
A	LYS103
A	TYR181
A	TYR188
A	PHE227
A	TRP229
A	LEU234
A	HIS235

---

site_id	AC2
Number of Residues	4
Details	binding site for residue SO4 A 602

Chain	Residue
A	LYS73
A	TYR146
A	PRO150
A	GLN151

---

site_id	AC3
Number of Residues	4
Details	binding site for residue SO4 A 603

Chain	Residue
A	LYS476
A	SER515
A	GLU516
A	LEU517

---

site_id	AC4
Number of Residues	5
Details	binding site for residue SO4 A 604

Chain	Residue
A	LYS331
A	GLY333
A	GLN334
A	LYS512
A	HOH728

---

site_id	AC5
Number of Residues	4
Details	binding site for residue SO4 A 605

Chain	Residue
A	ARG277
A	GLN278
A	LYS281
A	HOH714

---

site_id	AC6
Number of Residues	3
Details	binding site for residue EDO A 606

Chain	Residue
A	THR473
A	ASN474
A	GLN475

---

site_id	AC7
Number of Residues	2
Details	binding site for residue EDO A 607

Chain	Residue
A	SER3
A	HOH722

---

site_id	AC8
Number of Residues	5
Details	binding site for residue EDO A 608

Chain	Residue
A	LEU425
A	TRP426
A	TYR427
A	GLN509
A	HOH805

---

site_id	AC9
Number of Residues	7
Details	binding site for residue EDO A 609

Chain	Residue
A	GLN161
A	ILE180
A	TYR181
A	GLN182
B	GLU138
B	THR139
B	PRO140

---

site_id	AD1
Number of Residues	4
Details	binding site for residue EDO A 610

Chain	Residue
A	GLU6
A	VAL8
A	SER163
A	HOH830

---

site_id	AD2
Number of Residues	7
Details	binding site for residue MG A 611

Chain	Residue
A	ASP443
A	ASP498
A	ASP549
A	HOH743
A	HOH760
A	HOH827
A	HOH831

---

site_id	AD3
Number of Residues	2
Details	binding site for residue SO4 B 501

Chain	Residue
B	HIS235
B	TRP239

---

site_id	AD4
Number of Residues	8
Details	binding site for residue SO4 B 502

Chain	Residue
A	THR403
A	GLU404
A	TYR405
B	LYS331
B	GLN332
B	GLY333
B	LYS424
B	HOH682

---

site_id	AD5
Number of Residues	4
Details	binding site for residue SO4 B 503

Chain	Residue
A	LYS104
B	PRO97
B	ALA98
B	GLY99

---

site_id	AD6
Number of Residues	5
Details	binding site for residue EDO B 504

Chain	Residue
B	TRP24
B	GLU399
B	TRP402
B	THR403
B	HOH601

---

Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI1
Number of Residues	190
Details	Domain: {"description":"Reverse transcriptase","evidences":[{"source":"PROSITE-ProRule","id":"PRU00405","evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI2
Number of Residues	16
Details	Region: {"description":"RT 'primer grip'"}

Chain

Residue

Details

---

site_id	SWS_FT_FI3
Number of Residues	32
Details	Motif: {"description":"Tryptophan repeat motif"}

Chain

Residue

Details

---

site_id	SWS_FT_FI4
Number of Residues	6
Details	Binding site: {}

Chain

Residue

Details

---

site_id	SWS_FT_FI5
Number of Residues	4
Details	Binding site: {"evidences":[{"evidenceCode":"ECO:0000305"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI6
Number of Residues	4
Details	Site: {"description":"Essential for RT p66/p51 heterodimerization"}

Chain

Residue

Details

---

site_id	SWS_FT_FI7
Number of Residues	1
Details	Site: {"description":"Cleavage; by viral protease; partial"}

Chain

Residue

Details

---