6UEP
Structure of A. thaliana TBP bound to a DNA site with a C-C mismatch
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0003677 | molecular_function | DNA binding |
| A | 0005515 | molecular_function | protein binding |
| A | 0005634 | cellular_component | nucleus |
| A | 0005975 | biological_process | carbohydrate metabolic process |
| A | 0006351 | biological_process | DNA-templated transcription |
| A | 0006352 | biological_process | DNA-templated transcription initiation |
| A | 0006366 | biological_process | transcription by RNA polymerase II |
| A | 0016251 | molecular_function | RNA polymerase II general transcription initiation factor activity |
| B | 0003677 | molecular_function | DNA binding |
| B | 0005515 | molecular_function | protein binding |
| B | 0005634 | cellular_component | nucleus |
| B | 0005975 | biological_process | carbohydrate metabolic process |
| B | 0006351 | biological_process | DNA-templated transcription |
| B | 0006352 | biological_process | DNA-templated transcription initiation |
| B | 0006366 | biological_process | transcription by RNA polymerase II |
| B | 0016251 | molecular_function | RNA polymerase II general transcription initiation factor activity |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 2 |
| Details | binding site for residue FMT B 301 |
| Chain | Residue |
| B | THR31 |
| B | ASP112 |
| site_id | AC2 |
| Number of Residues | 1 |
| Details | binding site for residue FMT B 302 |
| Chain | Residue |
| B | HOH414 |
| site_id | AC3 |
| Number of Residues | 4 |
| Details | binding site for residue FMT E 301 |
| Chain | Residue |
| E | DC213 |
| E | HOH431 |
| F | DG216 |
| F | DC217 |
| site_id | AC4 |
| Number of Residues | 5 |
| Details | binding site for residue GOL D 301 |
| Chain | Residue |
| C | HOH302 |
| D | DC220 |
| D | HOH410 |
| C | DC202 |
| C | HOH301 |
| site_id | AC5 |
| Number of Residues | 6 |
| Details | binding site for residue GOL D 302 |
| Chain | Residue |
| A | PRO145 |
| A | GLU146 |
| A | LEU147 |
| A | HOH301 |
| D | DG227 |
| D | DC228 |
Functional Information from PROSITE/UniProt
| site_id | PS00351 |
| Number of Residues | 50 |
| Details | TFIID Transcription factor TFIID repeat signature. YnPkrFaaVImRirePKttaLIFaSGKMvctGAKsedfskmAarkyariV |
| Chain | Residue | Details |
| B | TYR52-VAL101 | |
| B | TYR143-LEU192 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 152 |
| Details | Repeat: {"description":"1","evidences":[{"evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI2 |
| Number of Residues | 154 |
| Details | Repeat: {"description":"2","evidences":[{"evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
