Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0003824 | molecular_function | catalytic activity |
A | 0005524 | molecular_function | ATP binding |
A | 0005737 | cellular_component | cytoplasm |
A | 0005829 | cellular_component | cytosol |
A | 0008360 | biological_process | regulation of cell shape |
A | 0008716 | molecular_function | D-alanine-D-alanine ligase activity |
A | 0009252 | biological_process | peptidoglycan biosynthetic process |
A | 0016874 | molecular_function | ligase activity |
A | 0046872 | molecular_function | metal ion binding |
A | 0071555 | biological_process | cell wall organization |
B | 0003824 | molecular_function | catalytic activity |
B | 0005524 | molecular_function | ATP binding |
B | 0005737 | cellular_component | cytoplasm |
B | 0005829 | cellular_component | cytosol |
B | 0008360 | biological_process | regulation of cell shape |
B | 0008716 | molecular_function | D-alanine-D-alanine ligase activity |
B | 0009252 | biological_process | peptidoglycan biosynthetic process |
B | 0016874 | molecular_function | ligase activity |
B | 0046872 | molecular_function | metal ion binding |
B | 0071555 | biological_process | cell wall organization |
C | 0003824 | molecular_function | catalytic activity |
C | 0005524 | molecular_function | ATP binding |
C | 0005737 | cellular_component | cytoplasm |
C | 0005829 | cellular_component | cytosol |
C | 0008360 | biological_process | regulation of cell shape |
C | 0008716 | molecular_function | D-alanine-D-alanine ligase activity |
C | 0009252 | biological_process | peptidoglycan biosynthetic process |
C | 0016874 | molecular_function | ligase activity |
C | 0046872 | molecular_function | metal ion binding |
C | 0071555 | biological_process | cell wall organization |
D | 0003824 | molecular_function | catalytic activity |
D | 0005524 | molecular_function | ATP binding |
D | 0005737 | cellular_component | cytoplasm |
D | 0005829 | cellular_component | cytosol |
D | 0008360 | biological_process | regulation of cell shape |
D | 0008716 | molecular_function | D-alanine-D-alanine ligase activity |
D | 0009252 | biological_process | peptidoglycan biosynthetic process |
D | 0016874 | molecular_function | ligase activity |
D | 0046872 | molecular_function | metal ion binding |
D | 0071555 | biological_process | cell wall organization |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 6 |
Details | binding site for residue MG A 401 |
Chain | Residue |
A | GLU282 |
A | ASN284 |
A | PO4403 |
A | K404 |
A | ADP405 |
A | HOH567 |
site_id | AC2 |
Number of Residues | 6 |
Details | binding site for residue MG A 402 |
Chain | Residue |
A | ADP405 |
A | HOH503 |
A | HOH550 |
A | LYS228 |
A | GLU282 |
A | PO4403 |
site_id | AC3 |
Number of Residues | 11 |
Details | binding site for residue PO4 A 403 |
Chain | Residue |
A | SER159 |
A | LYS228 |
A | ARG268 |
A | ASP270 |
A | GLU282 |
A | ASN284 |
A | MG401 |
A | MG402 |
A | ADP405 |
A | HOH535 |
A | HOH550 |
site_id | AC4 |
Number of Residues | 8 |
Details | binding site for residue K A 404 |
Chain | Residue |
A | CYS113 |
A | GLU282 |
A | LEU283 |
A | ASN284 |
A | MG401 |
A | HOH558 |
A | HOH565 |
A | HOH567 |
site_id | AC5 |
Number of Residues | 27 |
Details | binding site for residue ADP A 405 |
Chain | Residue |
A | LYS116 |
A | VAL131 |
A | PHE151 |
A | LYS153 |
A | THR157 |
A | GLY158 |
A | SER159 |
A | SER160 |
A | ILE163 |
A | GLU189 |
A | LYS190 |
A | ALA191 |
A | LEU192 |
A | GLU197 |
A | TYR218 |
A | PHE222 |
A | TYR223 |
A | LYS228 |
A | PHE272 |
A | ASN281 |
A | GLU282 |
A | MG401 |
A | MG402 |
A | PO4403 |
A | HOH503 |
A | HOH550 |
A | HOH577 |
site_id | AC6 |
Number of Residues | 4 |
Details | binding site for residue MG B 401 |
Chain | Residue |
B | GLU282 |
B | ADP402 |
B | HOH506 |
B | HOH551 |
site_id | AC7 |
Number of Residues | 23 |
Details | binding site for residue ADP B 402 |
Chain | Residue |
B | LYS116 |
B | PHE151 |
B | LYS153 |
B | GLY158 |
B | SER159 |
B | SER160 |
B | ILE163 |
B | GLU189 |
B | LYS190 |
B | LEU192 |
B | GLU197 |
B | TYR218 |
B | PHE222 |
B | TYR223 |
B | PHE272 |
B | ASN281 |
B | GLU282 |
B | MG401 |
B | HOH506 |
B | HOH515 |
B | HOH529 |
B | HOH543 |
B | HOH551 |
site_id | AC8 |
Number of Residues | 7 |
Details | binding site for residue MG C 401 |
Chain | Residue |
C | LYS228 |
C | GLU282 |
C | MG402 |
C | PO4403 |
C | ADP405 |
C | HOH506 |
C | HOH528 |
site_id | AC9 |
Number of Residues | 6 |
Details | binding site for residue MG C 402 |
Chain | Residue |
C | GLU282 |
C | ASN284 |
C | MG401 |
C | PO4403 |
C | ADP405 |
C | HOH520 |
site_id | AD1 |
Number of Residues | 12 |
Details | binding site for residue PO4 C 403 |
Chain | Residue |
C | LYS228 |
C | ARG268 |
C | ASP270 |
C | GLU282 |
C | ASN284 |
C | MG401 |
C | MG402 |
C | ADP405 |
C | HOH531 |
C | HOH534 |
C | HOH560 |
C | SER159 |
site_id | AD2 |
Number of Residues | 6 |
Details | binding site for residue K C 404 |
Chain | Residue |
C | CYS113 |
C | GLU282 |
C | LEU283 |
C | ASN284 |
C | HOH559 |
C | HOH567 |
site_id | AD3 |
Number of Residues | 25 |
Details | binding site for residue ADP C 405 |
Chain | Residue |
C | LYS116 |
C | PHE151 |
C | LYS153 |
C | GLY158 |
C | SER159 |
C | SER160 |
C | ILE163 |
C | GLU189 |
C | LYS190 |
C | ALA191 |
C | LEU192 |
C | GLU197 |
C | TYR218 |
C | PHE222 |
C | TYR223 |
C | LYS228 |
C | PHE272 |
C | ASN281 |
C | GLU282 |
C | MG401 |
C | MG402 |
C | PO4403 |
C | HOH506 |
C | HOH528 |
C | HOH533 |
site_id | AD4 |
Number of Residues | 14 |
Details | binding site for residue ADP D 401 |
Chain | Residue |
D | LYS116 |
D | PHE151 |
D | LYS153 |
D | GLY158 |
D | ILE163 |
D | GLU189 |
D | LYS190 |
D | LEU192 |
D | VAL195 |
D | GLU197 |
D | PHE272 |
D | ASN281 |
D | GLU282 |
D | HOH501 |
Functional Information from PROSITE/UniProt
site_id | PS00843 |
Number of Residues | 12 |
Details | DALA_DALA_LIGASE_1 D-alanine--D-alanine ligase signature 1. HGrfGEDGtVQG |
Chain | Residue | Details |
A | HIS82-GLY93 | |
site_id | PS00844 |
Number of Residues | 28 |
Details | DALA_DALA_LIGASE_2 D-alanine--D-alanine ligase signature 2. LgvrGmARVDFFlaegely.....LnELNTiPG |
Chain | Residue | Details |
A | LEU261-GLY288 | |
Functional Information from SwissProt/UniProt
Chain | Residue | Details |
A | ASP147 | |
C | ASP270 | |
C | GLU282 | |
C | ASN284 | |
D | ASP147 | |
D | ASP270 | |
D | GLU282 | |
D | ASN284 | |
A | ASP270 | |
A | GLU282 | |
A | ASN284 | |
B | ASP147 | |
B | ASP270 | |
B | GLU282 | |
B | ASN284 | |
C | ASP147 | |