Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0000166 | molecular_function | nucleotide binding |
| A | 0005524 | molecular_function | ATP binding |
| A | 0005737 | cellular_component | cytoplasm |
| A | 0005829 | cellular_component | cytosol |
| A | 0008360 | biological_process | regulation of cell shape |
| A | 0008716 | molecular_function | D-alanine-D-alanine ligase activity |
| A | 0009252 | biological_process | peptidoglycan biosynthetic process |
| A | 0016874 | molecular_function | ligase activity |
| A | 0046872 | molecular_function | metal ion binding |
| A | 0071555 | biological_process | cell wall organization |
| B | 0000166 | molecular_function | nucleotide binding |
| B | 0005524 | molecular_function | ATP binding |
| B | 0005737 | cellular_component | cytoplasm |
| B | 0005829 | cellular_component | cytosol |
| B | 0008360 | biological_process | regulation of cell shape |
| B | 0008716 | molecular_function | D-alanine-D-alanine ligase activity |
| B | 0009252 | biological_process | peptidoglycan biosynthetic process |
| B | 0016874 | molecular_function | ligase activity |
| B | 0046872 | molecular_function | metal ion binding |
| B | 0071555 | biological_process | cell wall organization |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 4 |
| Details | binding site for residue MG A 403 |
| Chain | Residue |
| A | ASP270 |
| A | GLU282 |
| A | ATP407 |
| A | HOH553 |
| site_id | AC2 |
| Number of Residues | 5 |
| Details | binding site for residue MG A 404 |
| Chain | Residue |
| A | GLU282 |
| A | ASN284 |
| A | CS405 |
| A | ATP407 |
| A | HOH504 |
| site_id | AC3 |
| Number of Residues | 5 |
| Details | binding site for residue CS A 405 |
| Chain | Residue |
| A | CYS113 |
| A | GLU282 |
| A | LEU283 |
| A | ASN284 |
| A | MG404 |
| site_id | AC4 |
| Number of Residues | 1 |
| Details | binding site for residue CS A 406 |
| site_id | AC5 |
| Number of Residues | 30 |
| Details | binding site for residue ATP A 407 |
| Chain | Residue |
| A | LYS116 |
| A | PHE151 |
| A | LYS153 |
| A | THR157 |
| A | GLY158 |
| A | SER159 |
| A | SER160 |
| A | ILE163 |
| A | GLU189 |
| A | LYS190 |
| A | LEU192 |
| A | GLU197 |
| A | TYR218 |
| A | PHE222 |
| A | TYR223 |
| A | LYS228 |
| A | ARG268 |
| A | ASP270 |
| A | PHE272 |
| A | ASN281 |
| A | GLU282 |
| A | ASN284 |
| A | DAL401 |
| A | DAL402 |
| A | MG403 |
| A | MG404 |
| A | HOH504 |
| A | HOH538 |
| A | HOH553 |
| A | HOH556 |
| site_id | AC6 |
| Number of Residues | 5 |
| Details | binding site for residue MG B 403 |
| Chain | Residue |
| B | GLU282 |
| B | ASN284 |
| B | CS405 |
| B | ATP407 |
| B | HOH542 |
| site_id | AC7 |
| Number of Residues | 4 |
| Details | binding site for residue MG B 404 |
| Chain | Residue |
| B | ASP270 |
| B | GLU282 |
| B | ATP407 |
| B | HOH560 |
| site_id | AC8 |
| Number of Residues | 6 |
| Details | binding site for residue CS B 405 |
| Chain | Residue |
| B | CYS113 |
| B | GLU282 |
| B | LEU283 |
| B | ASN284 |
| B | MG403 |
| B | HOH542 |
| site_id | AC9 |
| Number of Residues | 1 |
| Details | binding site for residue CS B 406 |
| site_id | AD1 |
| Number of Residues | 32 |
| Details | binding site for residue ATP B 407 |
| Chain | Residue |
| B | LYS116 |
| B | PHE151 |
| B | LYS153 |
| B | THR157 |
| B | GLY158 |
| B | SER159 |
| B | SER160 |
| B | ILE163 |
| B | GLU189 |
| B | LYS190 |
| B | ALA191 |
| B | LEU192 |
| B | GLU197 |
| B | TYR218 |
| B | PHE222 |
| B | TYR223 |
| B | LYS228 |
| B | ARG268 |
| B | ASP270 |
| B | PHE272 |
| B | ASN281 |
| B | GLU282 |
| B | ASN284 |
| B | DAL401 |
| B | DAL402 |
| B | MG403 |
| B | MG404 |
| B | HOH540 |
| B | HOH542 |
| B | HOH549 |
| B | HOH560 |
| B | HOH593 |
| site_id | AD2 |
| Number of Residues | 12 |
| Details | binding site for Di-peptide DAL A 401 and DAL A 402 |
| Chain | Residue |
| A | SER293 |
| A | MET294 |
| A | ATP407 |
| A | HOH513 |
| A | HOH515 |
| A | HOH531 |
| A | GLU13 |
| A | HIS82 |
| A | LYS228 |
| A | TYR229 |
| A | ARG268 |
| A | GLY288 |
| site_id | AD3 |
| Number of Residues | 13 |
| Details | binding site for Di-peptide DAL B 401 and DAL B 402 |
| Chain | Residue |
| B | GLU13 |
| B | HIS82 |
| B | SER159 |
| B | LYS228 |
| B | TYR229 |
| B | ARG268 |
| B | GLY288 |
| B | SER293 |
| B | MET294 |
| B | ATP407 |
| B | HOH513 |
| B | HOH561 |
| B | HOH569 |
Functional Information from PROSITE/UniProt
| site_id | PS00843 |
| Number of Residues | 12 |
| Details | DALA_DALA_LIGASE_1 D-alanine--D-alanine ligase signature 1. HGrfGEDGtVQG |
| Chain | Residue | Details |
| A | HIS82-GLY93 | |
| site_id | PS00844 |
| Number of Residues | 28 |
| Details | DALA_DALA_LIGASE_2 D-alanine--D-alanine ligase signature 2. LgvrGmARVDFFlaegely.....LnELNTiPG |
| Chain | Residue | Details |
| A | LEU261-GLY288 | |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 390 |
| Details | Domain: {"description":"ATP-grasp","evidences":[{"source":"HAMAP-Rule","id":"MF_00047","evidenceCode":"ECO:0000255"}]} |
| site_id | SWS_FT_FI2 |
| Number of Residues | 108 |
| Details | Binding site: {"evidences":[{"source":"HAMAP-Rule","id":"MF_00047","evidenceCode":"ECO:0000255"}]} |
