Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0003824 | molecular_function | catalytic activity |
A | 0005524 | molecular_function | ATP binding |
A | 0005737 | cellular_component | cytoplasm |
A | 0005829 | cellular_component | cytosol |
A | 0008360 | biological_process | regulation of cell shape |
A | 0008716 | molecular_function | D-alanine-D-alanine ligase activity |
A | 0009252 | biological_process | peptidoglycan biosynthetic process |
A | 0016874 | molecular_function | ligase activity |
A | 0046872 | molecular_function | metal ion binding |
A | 0071555 | biological_process | cell wall organization |
B | 0003824 | molecular_function | catalytic activity |
B | 0005524 | molecular_function | ATP binding |
B | 0005737 | cellular_component | cytoplasm |
B | 0005829 | cellular_component | cytosol |
B | 0008360 | biological_process | regulation of cell shape |
B | 0008716 | molecular_function | D-alanine-D-alanine ligase activity |
B | 0009252 | biological_process | peptidoglycan biosynthetic process |
B | 0016874 | molecular_function | ligase activity |
B | 0046872 | molecular_function | metal ion binding |
B | 0071555 | biological_process | cell wall organization |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 4 |
Details | binding site for residue MG A 403 |
Chain | Residue |
A | ASP270 |
A | GLU282 |
A | ATP407 |
A | HOH579 |
site_id | AC2 |
Number of Residues | 5 |
Details | binding site for residue MG A 404 |
Chain | Residue |
A | GLU282 |
A | ASN284 |
A | RB405 |
A | ATP407 |
A | HOH585 |
site_id | AC3 |
Number of Residues | 7 |
Details | binding site for residue RB A 405 |
Chain | Residue |
A | CYS113 |
A | GLU282 |
A | LEU283 |
A | ASN284 |
A | MG404 |
A | HOH516 |
A | HOH596 |
site_id | AC4 |
Number of Residues | 3 |
Details | binding site for residue RB A 406 |
Chain | Residue |
A | TRP133 |
A | HOH641 |
B | HOH605 |
site_id | AC5 |
Number of Residues | 31 |
Details | binding site for residue ATP A 407 |
Chain | Residue |
A | LYS116 |
A | PHE151 |
A | LYS153 |
A | GLY158 |
A | SER159 |
A | SER160 |
A | ILE163 |
A | GLU189 |
A | LYS190 |
A | ALA191 |
A | LEU192 |
A | GLU197 |
A | TYR218 |
A | PHE222 |
A | TYR223 |
A | LYS228 |
A | ARG268 |
A | ASP270 |
A | PHE272 |
A | ASN281 |
A | GLU282 |
A | ASN284 |
A | DAL401 |
A | DAL402 |
A | MG403 |
A | MG404 |
A | HOH553 |
A | HOH573 |
A | HOH579 |
A | HOH585 |
A | HOH604 |
site_id | AC6 |
Number of Residues | 5 |
Details | binding site for residue MG B 403 |
Chain | Residue |
B | ASP270 |
B | ASN281 |
B | GLU282 |
B | ATP407 |
B | HOH555 |
site_id | AC7 |
Number of Residues | 5 |
Details | binding site for residue MG B 404 |
Chain | Residue |
B | GLU282 |
B | ASN284 |
B | RB405 |
B | ATP407 |
B | HOH574 |
site_id | AC8 |
Number of Residues | 6 |
Details | binding site for residue RB B 405 |
Chain | Residue |
B | CYS113 |
B | GLU282 |
B | LEU283 |
B | ASN284 |
B | MG404 |
B | HOH510 |
site_id | AC9 |
Number of Residues | 3 |
Details | binding site for residue RB B 406 |
Chain | Residue |
A | HOH642 |
B | TRP133 |
B | HOH607 |
site_id | AD1 |
Number of Residues | 30 |
Details | binding site for residue ATP B 407 |
Chain | Residue |
B | LYS116 |
B | PHE151 |
B | LYS153 |
B | GLY158 |
B | SER159 |
B | SER160 |
B | ILE163 |
B | GLU189 |
B | LYS190 |
B | ALA191 |
B | LEU192 |
B | GLU197 |
B | TYR218 |
B | PHE222 |
B | TYR223 |
B | LYS228 |
B | ARG268 |
B | ASP270 |
B | PHE272 |
B | ASN281 |
B | GLU282 |
B | ASN284 |
B | DAL401 |
B | DAL402 |
B | MG403 |
B | MG404 |
B | HOH522 |
B | HOH528 |
B | HOH555 |
B | HOH574 |
site_id | AD2 |
Number of Residues | 13 |
Details | binding site for Di-peptide DAL A 401 and DAL A 402 |
Chain | Residue |
A | GLU13 |
A | HIS82 |
A | SER159 |
A | LYS228 |
A | TYR229 |
A | ARG268 |
A | GLY288 |
A | SER293 |
A | MET294 |
A | ATP407 |
A | HOH509 |
A | HOH576 |
A | HOH589 |
site_id | AD3 |
Number of Residues | 13 |
Details | binding site for Di-peptide DAL B 401 and DAL B 402 |
Chain | Residue |
B | GLU13 |
B | HIS82 |
B | SER159 |
B | LYS228 |
B | TYR229 |
B | ARG268 |
B | GLY288 |
B | SER293 |
B | MET294 |
B | ATP407 |
B | HOH509 |
B | HOH546 |
B | HOH561 |
Functional Information from PROSITE/UniProt
site_id | PS00843 |
Number of Residues | 12 |
Details | DALA_DALA_LIGASE_1 D-alanine--D-alanine ligase signature 1. HGrfGEDGtVQG |
Chain | Residue | Details |
A | HIS82-GLY93 | |
site_id | PS00844 |
Number of Residues | 28 |
Details | DALA_DALA_LIGASE_2 D-alanine--D-alanine ligase signature 2. LgvrGmARVDFFlaegely.....LnELNTiPG |
Chain | Residue | Details |
A | LEU261-GLY288 | |
Functional Information from SwissProt/UniProt
Chain | Residue | Details |
A | ASP147 | |
A | ASP270 | |
A | GLU282 | |
A | ASN284 | |
B | ASP147 | |
B | ASP270 | |
B | GLU282 | |
B | ASN284 | |