Summary Structural details Experimental details Functional details Sequence Neighbor History Downloads

6TDY

Cryo-EM structure of Euglena gracilis mitochondrial ATP synthase, OSCP/F1/c-ring in rotational state 1

Functional Information from GO Data

Chain	GOid	namespace	contents
A	0005524	molecular_function	ATP binding
A	0015986	biological_process	proton motive force-driven ATP synthesis
A	0032559	molecular_function	adenyl ribonucleotide binding
A	0045261	cellular_component	proton-transporting ATP synthase complex, catalytic core F(1)
A	0046933	molecular_function	proton-transporting ATP synthase activity, rotational mechanism
B	0005524	molecular_function	ATP binding
B	0015986	biological_process	proton motive force-driven ATP synthesis
B	0032559	molecular_function	adenyl ribonucleotide binding
B	0045261	cellular_component	proton-transporting ATP synthase complex, catalytic core F(1)
B	0046933	molecular_function	proton-transporting ATP synthase activity, rotational mechanism
C	0005524	molecular_function	ATP binding
C	0015986	biological_process	proton motive force-driven ATP synthesis
C	0032559	molecular_function	adenyl ribonucleotide binding
C	0045261	cellular_component	proton-transporting ATP synthase complex, catalytic core F(1)
C	0046933	molecular_function	proton-transporting ATP synthase activity, rotational mechanism
D	0005524	molecular_function	ATP binding
D	0015986	biological_process	proton motive force-driven ATP synthesis
D	0016887	molecular_function	ATP hydrolysis activity
D	0045261	cellular_component	proton-transporting ATP synthase complex, catalytic core F(1)
D	0046034	biological_process	ATP metabolic process
D	0046933	molecular_function	proton-transporting ATP synthase activity, rotational mechanism
D	1902600	biological_process	proton transmembrane transport
E	0005524	molecular_function	ATP binding
E	0015986	biological_process	proton motive force-driven ATP synthesis
E	0016887	molecular_function	ATP hydrolysis activity
E	0045261	cellular_component	proton-transporting ATP synthase complex, catalytic core F(1)
E	0046034	biological_process	ATP metabolic process
E	0046933	molecular_function	proton-transporting ATP synthase activity, rotational mechanism
E	1902600	biological_process	proton transmembrane transport
F	0005524	molecular_function	ATP binding
F	0015986	biological_process	proton motive force-driven ATP synthesis
F	0016887	molecular_function	ATP hydrolysis activity
F	0045261	cellular_component	proton-transporting ATP synthase complex, catalytic core F(1)
F	0046034	biological_process	ATP metabolic process
F	0046933	molecular_function	proton-transporting ATP synthase activity, rotational mechanism
F	1902600	biological_process	proton transmembrane transport
G	0015986	biological_process	proton motive force-driven ATP synthesis
G	0045261	cellular_component	proton-transporting ATP synthase complex, catalytic core F(1)
G	0046933	molecular_function	proton-transporting ATP synthase activity, rotational mechanism
H	0015986	biological_process	proton motive force-driven ATP synthesis
H	0045261	cellular_component	proton-transporting ATP synthase complex, catalytic core F(1)
H	0046933	molecular_function	proton-transporting ATP synthase activity, rotational mechanism
I	0015986	biological_process	proton motive force-driven ATP synthesis
I	0045261	cellular_component	proton-transporting ATP synthase complex, catalytic core F(1)
I	0046933	molecular_function	proton-transporting ATP synthase activity, rotational mechanism
M	0015986	biological_process	proton motive force-driven ATP synthesis
M	0046933	molecular_function	proton-transporting ATP synthase activity, rotational mechanism
O	0015078	molecular_function	proton transmembrane transporter activity
O	0015986	biological_process	proton motive force-driven ATP synthesis
O	0033177	cellular_component	proton-transporting two-sector ATPase complex, proton-transporting domain
O	0045263	cellular_component	proton-transporting ATP synthase complex, coupling factor F(o)
O	1902600	biological_process	proton transmembrane transport
P	0015078	molecular_function	proton transmembrane transporter activity
P	0015986	biological_process	proton motive force-driven ATP synthesis
P	0033177	cellular_component	proton-transporting two-sector ATPase complex, proton-transporting domain
P	0045263	cellular_component	proton-transporting ATP synthase complex, coupling factor F(o)
P	1902600	biological_process	proton transmembrane transport
Q	0015078	molecular_function	proton transmembrane transporter activity
Q	0015986	biological_process	proton motive force-driven ATP synthesis
Q	0033177	cellular_component	proton-transporting two-sector ATPase complex, proton-transporting domain
Q	0045263	cellular_component	proton-transporting ATP synthase complex, coupling factor F(o)
Q	1902600	biological_process	proton transmembrane transport
R	0015078	molecular_function	proton transmembrane transporter activity
R	0015986	biological_process	proton motive force-driven ATP synthesis
R	0033177	cellular_component	proton-transporting two-sector ATPase complex, proton-transporting domain
R	0045263	cellular_component	proton-transporting ATP synthase complex, coupling factor F(o)
R	1902600	biological_process	proton transmembrane transport
S	0015078	molecular_function	proton transmembrane transporter activity
S	0015986	biological_process	proton motive force-driven ATP synthesis
S	0033177	cellular_component	proton-transporting two-sector ATPase complex, proton-transporting domain
S	0045263	cellular_component	proton-transporting ATP synthase complex, coupling factor F(o)
S	1902600	biological_process	proton transmembrane transport
T	0015078	molecular_function	proton transmembrane transporter activity
T	0015986	biological_process	proton motive force-driven ATP synthesis
T	0033177	cellular_component	proton-transporting two-sector ATPase complex, proton-transporting domain
T	0045263	cellular_component	proton-transporting ATP synthase complex, coupling factor F(o)
T	1902600	biological_process	proton transmembrane transport
U	0015078	molecular_function	proton transmembrane transporter activity
U	0015986	biological_process	proton motive force-driven ATP synthesis
U	0033177	cellular_component	proton-transporting two-sector ATPase complex, proton-transporting domain
U	0045263	cellular_component	proton-transporting ATP synthase complex, coupling factor F(o)
U	1902600	biological_process	proton transmembrane transport
V	0015078	molecular_function	proton transmembrane transporter activity
V	0015986	biological_process	proton motive force-driven ATP synthesis
V	0033177	cellular_component	proton-transporting two-sector ATPase complex, proton-transporting domain
V	0045263	cellular_component	proton-transporting ATP synthase complex, coupling factor F(o)
V	1902600	biological_process	proton transmembrane transport
W	0015078	molecular_function	proton transmembrane transporter activity
W	0015986	biological_process	proton motive force-driven ATP synthesis
W	0033177	cellular_component	proton-transporting two-sector ATPase complex, proton-transporting domain
W	0045263	cellular_component	proton-transporting ATP synthase complex, coupling factor F(o)
W	1902600	biological_process	proton transmembrane transport
X	0015078	molecular_function	proton transmembrane transporter activity
X	0015986	biological_process	proton motive force-driven ATP synthesis
X	0033177	cellular_component	proton-transporting two-sector ATPase complex, proton-transporting domain
X	0045263	cellular_component	proton-transporting ATP synthase complex, coupling factor F(o)
X	1902600	biological_process	proton transmembrane transport

Functional Information from PDB Data

site_id	AC1
Number of Residues	11
Details	binding site for residue ATP A 601

Chain	Residue
A	ARG186
A	GLN442
A	MG602
A	GLN187
A	THR188
A	GLY189
A	LYS190
A	THR191
A	SER192
A	PHE372
A	ARG377

site_id	AC2
Number of Residues	3
Details	binding site for residue MG A 602

Chain	Residue
A	THR191
A	ASP284
A	ATP601

site_id	AC3
Number of Residues	15
Details	binding site for residue ATP B 601

Chain	Residue
B	ARG186
B	GLN187
B	THR188
B	GLY189
B	LYS190
B	THR191
B	SER192
B	PHE372
B	ARG377
B	PRO378
B	GLN442
B	LYS443
B	MG602
E	ARG366
E	ASP369

site_id	AC4
Number of Residues	4
Details	binding site for residue MG B 602

Chain	Residue
B	THR191
B	GLN223
B	ASP284
B	ATP601

site_id	AC5
Number of Residues	13
Details	binding site for residue ATP C 601

Chain	Residue
C	GLN187
C	THR188
C	GLY189
C	LYS190
C	THR191
C	SER192
C	PHE372
C	ARG377
C	PRO378
C	GLN442
C	LYS443
C	MG602
F	ASP369

site_id	AC6
Number of Residues	2
Details	binding site for residue MG C 602

Chain	Residue
C	THR191
C	ATP601

site_id	AC7
Number of Residues	14
Details	binding site for residue ADP D 601

Chain	Residue
C	ARG388
D	GLY168
D	ALA169
D	GLY170
D	VAL171
D	GLY172
D	LYS173
D	THR174
D	VAL175
D	TYR355
D	PHE428
D	PHE434
D	THR435
D	MG602

site_id	AC8
Number of Residues	2
Details	binding site for residue MG D 602

Chain	Residue
D	THR174
D	ADP601

site_id	AC9
Number of Residues	7
Details	binding site for residue TRT E 600

Chain	Residue
B	ARG186
B	PHE372
E	PHE166
E	PHE336
E	ASP340
E	THR342
E	SER365

site_id	AD1
Number of Residues	16
Details	binding site for residue ATP F 601

Chain	Residue
B	SER359
B	VAL386
B	ARG388
F	ALA169
F	GLY170
F	GLY172
F	LYS173
F	THR174
F	VAL175
F	GLU199
F	ARG200
F	TYR355
F	PHE428
F	ALA431
F	PHE434
F	MG602

site_id	AD2
Number of Residues	3
Details	binding site for residue MG F 602

Chain	Residue
F	THR174
F	GLU199
F	ATP601

Functional Information from PROSITE/UniProt

site_id	PS00152
Number of Residues	10
Details	ATPASE_ALPHA_BETA ATP synthase alpha and beta subunits signature. PAVNIGLSVS

Chain	Residue	Details
A	PRO378-SER387

site_id	PS00605
Number of Residues	22
Details	ATPASE_C ATP synthase c subunit signature. ARQPnmsakLlPycILgfaLsE

Chain	Residue	Details
O	ALA65-GLU86

		Sequence (fasta)
		PDBx/mmCIF
		PDBML format (no-atom)
		PDB format (full)
		Validation report (PDF)