6TDB
Neuropilin2-b1 domain in a complex with the C-terminal VEGFB167 peptide
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0001525 | biological_process | angiogenesis |
A | 0005021 | molecular_function | vascular endothelial growth factor receptor activity |
A | 0007411 | biological_process | axon guidance |
A | 0017154 | molecular_function | semaphorin receptor activity |
A | 0038084 | biological_process | vascular endothelial growth factor signaling pathway |
B | 0001525 | biological_process | angiogenesis |
B | 0005021 | molecular_function | vascular endothelial growth factor receptor activity |
B | 0007411 | biological_process | axon guidance |
B | 0017154 | molecular_function | semaphorin receptor activity |
B | 0038084 | biological_process | vascular endothelial growth factor signaling pathway |
C | 0001525 | biological_process | angiogenesis |
C | 0005021 | molecular_function | vascular endothelial growth factor receptor activity |
C | 0007411 | biological_process | axon guidance |
C | 0017154 | molecular_function | semaphorin receptor activity |
C | 0038084 | biological_process | vascular endothelial growth factor signaling pathway |
D | 0001525 | biological_process | angiogenesis |
D | 0005021 | molecular_function | vascular endothelial growth factor receptor activity |
D | 0007411 | biological_process | axon guidance |
D | 0017154 | molecular_function | semaphorin receptor activity |
D | 0038084 | biological_process | vascular endothelial growth factor signaling pathway |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 5 |
Details | binding site for residue EDO A 501 |
Chain | Residue |
A | LYS382 |
A | GLN385 |
A | ASN388 |
A | ASP389 |
A | ASN396 |
site_id | AC2 |
Number of Residues | 5 |
Details | binding site for residue EDO B 501 |
Chain | Residue |
B | ARG421 |
B | GLY313 |
B | ASN316 |
B | ALA347 |
B | ILE348 |
site_id | AC3 |
Number of Residues | 3 |
Details | binding site for residue EDO C 501 |
Chain | Residue |
C | ASN278 |
C | THR340 |
C | ALA341 |
site_id | AC4 |
Number of Residues | 8 |
Details | binding site for Di-peptide ACE F 301 and ARG F 228 |
Chain | Residue |
B | ASP301 |
B | TRP304 |
B | THR319 |
B | SER349 |
B | GLU351 |
B | TYR356 |
B | ILE418 |
F | LYS229 |
Functional Information from PROSITE/UniProt
site_id | PS01285 |
Number of Residues | 30 |
Details | FA58C_1 Coagulation factors 5/8 type C domain (FA58C) signature 1. GWtpnldsnke......YLqVDlrfltmLtaIaTQG |
Chain | Residue | Details |
A | GLY317-GLY346 |
site_id | PS01286 |
Number of Residues | 17 |
Details | FA58C_2 Coagulation factors 5/8 type C domain (FA58C) signature 2. Pqtwhsgia..LRlELfGC |
Chain | Residue | Details |
A | PRO411-CYS427 |