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6TDB

Neuropilin2-b1 domain in a complex with the C-terminal VEGFB167 peptide

Functional Information from GO Data
ChainGOidnamespacecontents
A0001525biological_processangiogenesis
A0005021molecular_functionvascular endothelial growth factor receptor activity
A0007411biological_processaxon guidance
A0017154molecular_functionsemaphorin receptor activity
A0038084biological_processvascular endothelial growth factor signaling pathway
B0001525biological_processangiogenesis
B0005021molecular_functionvascular endothelial growth factor receptor activity
B0007411biological_processaxon guidance
B0017154molecular_functionsemaphorin receptor activity
B0038084biological_processvascular endothelial growth factor signaling pathway
C0001525biological_processangiogenesis
C0005021molecular_functionvascular endothelial growth factor receptor activity
C0007411biological_processaxon guidance
C0017154molecular_functionsemaphorin receptor activity
C0038084biological_processvascular endothelial growth factor signaling pathway
D0001525biological_processangiogenesis
D0005021molecular_functionvascular endothelial growth factor receptor activity
D0007411biological_processaxon guidance
D0017154molecular_functionsemaphorin receptor activity
D0038084biological_processvascular endothelial growth factor signaling pathway
Functional Information from PDB Data
site_idAC1
Number of Residues5
Detailsbinding site for residue EDO A 501
ChainResidue
ALYS382
AGLN385
AASN388
AASP389
AASN396

site_idAC2
Number of Residues5
Detailsbinding site for residue EDO B 501
ChainResidue
BARG421
BGLY313
BASN316
BALA347
BILE348

site_idAC3
Number of Residues3
Detailsbinding site for residue EDO C 501
ChainResidue
CASN278
CTHR340
CALA341

site_idAC4
Number of Residues8
Detailsbinding site for Di-peptide ACE F 301 and ARG F 228
ChainResidue
BASP301
BTRP304
BTHR319
BSER349
BGLU351
BTYR356
BILE418
FLYS229

Functional Information from PROSITE/UniProt
site_idPS01285
Number of Residues30
DetailsFA58C_1 Coagulation factors 5/8 type C domain (FA58C) signature 1. GWtpnldsnke......YLqVDlrfltmLtaIaTQG
ChainResidueDetails
AGLY317-GLY346

site_idPS01286
Number of Residues17
DetailsFA58C_2 Coagulation factors 5/8 type C domain (FA58C) signature 2. Pqtwhsgia..LRlELfGC
ChainResidueDetails
APRO411-CYS427

225681

PDB entries from 2024-10-02

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