6T9J
SAGA Tra1 module
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| B | 0000124 | cellular_component | SAGA complex |
| B | 0003712 | molecular_function | transcription coregulator activity |
| B | 0005515 | molecular_function | protein binding |
| B | 0005634 | cellular_component | nucleus |
| B | 0006325 | biological_process | chromatin organization |
| B | 0006351 | biological_process | DNA-templated transcription |
| B | 0006357 | biological_process | regulation of transcription by RNA polymerase II |
| B | 0036498 | biological_process | IRE1-mediated unfolded protein response |
| B | 0046695 | cellular_component | SLIK (SAGA-like) complex |
| I | 0000124 | cellular_component | SAGA complex |
| I | 0003677 | molecular_function | DNA binding |
| I | 0003682 | molecular_function | chromatin binding |
| I | 0005515 | molecular_function | protein binding |
| I | 0005634 | cellular_component | nucleus |
| I | 0005669 | cellular_component | transcription factor TFIID complex |
| I | 0005777 | cellular_component | peroxisome |
| I | 0006325 | biological_process | chromatin organization |
| I | 0006351 | biological_process | DNA-templated transcription |
| I | 0006352 | biological_process | DNA-templated transcription initiation |
| I | 0006357 | biological_process | regulation of transcription by RNA polymerase II |
| I | 0006366 | biological_process | transcription by RNA polymerase II |
| I | 0017025 | molecular_function | TBP-class protein binding |
| I | 0042802 | molecular_function | identical protein binding |
| I | 0045944 | biological_process | positive regulation of transcription by RNA polymerase II |
| I | 0046695 | cellular_component | SLIK (SAGA-like) complex |
| I | 0046982 | molecular_function | protein heterodimerization activity |
| I | 0051123 | biological_process | RNA polymerase II preinitiation complex assembly |
| I | 0060090 | molecular_function | molecular adaptor activity |
| I | 0061629 | molecular_function | RNA polymerase II-specific DNA-binding transcription factor binding |
| I | 0070461 | cellular_component | SAGA-type complex |
| I | 1905368 | cellular_component | peptidase complex |
| T | 0000124 | cellular_component | SAGA complex |
| T | 0004402 | molecular_function | histone acetyltransferase activity |
| T | 0004672 | molecular_function | protein kinase activity |
| T | 0005515 | molecular_function | protein binding |
| T | 0005634 | cellular_component | nucleus |
| T | 0006281 | biological_process | DNA repair |
| T | 0006325 | biological_process | chromatin organization |
| T | 0006351 | biological_process | DNA-templated transcription |
| T | 0006355 | biological_process | regulation of DNA-templated transcription |
| T | 0006357 | biological_process | regulation of transcription by RNA polymerase II |
| T | 0033554 | biological_process | cellular response to stress |
| T | 0035267 | cellular_component | NuA4 histone acetyltransferase complex |
| T | 0045944 | biological_process | positive regulation of transcription by RNA polymerase II |
| T | 0046695 | cellular_component | SLIK (SAGA-like) complex |
| T | 0110078 | cellular_component | TTT Hsp90 cochaperone complex |
| T | 0140861 | biological_process | DNA repair-dependent chromatin remodeling |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 38 |
| Details | Repeat: {"description":"HEAT 1","evidences":[{"evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI2 |
| Number of Residues | 46 |
| Details | Repeat: {"description":"HEAT 2","evidences":[{"evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI3 |
| Number of Residues | 37 |
| Details | Repeat: {"description":"HEAT 3","evidences":[{"evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI4 |
| Number of Residues | 38 |
| Details | Repeat: {"description":"HEAT 6","evidences":[{"evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI5 |
| Number of Residues | 40 |
| Details | Repeat: {"description":"HEAT 7","evidences":[{"evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI6 |
| Number of Residues | 40 |
| Details | Repeat: {"description":"HEAT 8","evidences":[{"evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI7 |
| Number of Residues | 37 |
| Details | Repeat: {"description":"HEAT 9","evidences":[{"evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI8 |
| Number of Residues | 42 |
| Details | Repeat: {"description":"HEAT 10","evidences":[{"evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI9 |
| Number of Residues | 38 |
| Details | Repeat: {"description":"HEAT 11","evidences":[{"evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI10 |
| Number of Residues | 40 |
| Details | Repeat: {"description":"HEAT 12","evidences":[{"evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI11 |
| Number of Residues | 39 |
| Details | Repeat: {"description":"HEAT 13","evidences":[{"evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI12 |
| Number of Residues | 38 |
| Details | Repeat: {"description":"HEAT 14","evidences":[{"evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI13 |
| Number of Residues | 37 |
| Details | Repeat: {"description":"HEAT 15","evidences":[{"evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI14 |
| Number of Residues | 37 |
| Details | Repeat: {"description":"HEAT 16","evidences":[{"evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI15 |
| Number of Residues | 39 |
| Details | Repeat: {"description":"HEAT 17","evidences":[{"evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI16 |
| Number of Residues | 37 |
| Details | Repeat: {"description":"HEAT 18","evidences":[{"evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI17 |
| Number of Residues | 36 |
| Details | Repeat: {"description":"HEAT 19","evidences":[{"evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI18 |
| Number of Residues | 41 |
| Details | Repeat: {"description":"HEAT 20","evidences":[{"evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI19 |
| Number of Residues | 37 |
| Details | Repeat: {"description":"HEAT 21","evidences":[{"evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI20 |
| Number of Residues | 37 |
| Details | Repeat: {"description":"HEAT 22","evidences":[{"evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI21 |
| Number of Residues | 37 |
| Details | Repeat: {"description":"HEAT 24","evidences":[{"evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI22 |
| Number of Residues | 37 |
| Details | Repeat: {"description":"HEAT 25","evidences":[{"evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI23 |
| Number of Residues | 38 |
| Details | Repeat: {"description":"HEAT 26","evidences":[{"evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI24 |
| Number of Residues | 37 |
| Details | Repeat: {"description":"HEAT 27","evidences":[{"evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI25 |
| Number of Residues | 358 |
| Details | Domain: {"description":"PI3K/PI4K catalytic","evidences":[{"source":"PROSITE-ProRule","id":"PRU00269","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI26 |
| Number of Residues | 32 |
| Details | Domain: {"description":"FATC","evidences":[{"source":"PROSITE-ProRule","id":"PRU00534","evidenceCode":"ECO:0000255"},{"source":"PROSITE-ProRule","id":"PRU00535","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI27 |
| Number of Residues | 6 |
| Details | Region: {"description":"G-loop","evidences":[{"source":"PROSITE-ProRule","id":"PRU00269","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI28 |
| Number of Residues | 8 |
| Details | Region: {"description":"Catalytic loop","evidences":[{"source":"PROSITE-ProRule","id":"PRU00269","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI29 |
| Number of Residues | 25 |
| Details | Region: {"description":"Activation loop","evidences":[{"source":"PROSITE-ProRule","id":"PRU00269","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI30 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"N-acetylserine","evidences":[{"source":"PubMed","id":"22814378","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
