6T1B
Crystal structure of YlmD from Geobacillus stearothermophilus in complex with inosine
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0004000 | molecular_function | adenosine deaminase activity |
| A | 0004731 | molecular_function | purine-nucleoside phosphorylase activity |
| A | 0005507 | molecular_function | copper ion binding |
| A | 0016740 | molecular_function | transferase activity |
| A | 0016787 | molecular_function | hydrolase activity |
| A | 0017061 | molecular_function | S-methyl-5-thioadenosine phosphorylase activity |
| A | 0046872 | molecular_function | metal ion binding |
| A | 0046936 | molecular_function | 2'-deoxyadenosine deaminase activity |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 19 |
| Details | binding site for residue NOS A 301 |
| Chain | Residue |
| A | GLY45 |
| A | CYS121 |
| A | HIS142 |
| A | ARG262 |
| A | ZN303 |
| A | HOH401 |
| A | HOH431 |
| A | HOH438 |
| A | HOH450 |
| A | HOH526 |
| A | HOH567 |
| A | LEU46 |
| A | HIS47 |
| A | VAL48 |
| A | ARG59 |
| A | CYS76 |
| A | GLN78 |
| A | HIS80 |
| A | PHE99 |
| site_id | AC2 |
| Number of Residues | 5 |
| Details | binding site for residue ZN A 302 |
| Chain | Residue |
| A | CYS182 |
| A | CYS183 |
| A | CYS242 |
| A | SER244 |
| A | CYS245 |
| site_id | AC3 |
| Number of Residues | 4 |
| Details | binding site for residue ZN A 303 |
| Chain | Residue |
| A | HIS80 |
| A | CYS125 |
| A | HIS142 |
| A | NOS301 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 2 |
| Details | BINDING: BINDING => ECO:0000269|PubMed:31978345, ECO:0007744|PDB:6T1B |
| Chain | Residue | Details |
| A | ASN43 | |
| A | THR259 |
| site_id | SWS_FT_FI2 |
| Number of Residues | 3 |
| Details | BINDING: BINDING => ECO:0000305|PubMed:31978345, ECO:0007744|PDB:6T1B |
| Chain | Residue | Details |
| A | GLU77 | |
| A | PHE122 | |
| A | GLY139 |
| site_id | SWS_FT_FI3 |
| Number of Residues | 4 |
| Details | BINDING: BINDING => ECO:0000269|PubMed:31978345, ECO:0000269|Ref.2, ECO:0007744|PDB:1T8H, ECO:0007744|PDB:6T0Y, ECO:0007744|PDB:6T1B |
| Chain | Residue | Details |
| A | ILE179 | |
| A | GLY180 | |
| A | SER239 | |
| A | CYS242 |
