6T1B
Crystal structure of YlmD from Geobacillus stearothermophilus in complex with inosine
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0004000 | molecular_function | adenosine deaminase activity |
| A | 0004731 | molecular_function | purine-nucleoside phosphorylase activity |
| A | 0005507 | molecular_function | copper ion binding |
| A | 0016740 | molecular_function | transferase activity |
| A | 0016787 | molecular_function | hydrolase activity |
| A | 0017061 | molecular_function | S-methyl-5-thioadenosine phosphorylase activity |
| A | 0046872 | molecular_function | metal ion binding |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 19 |
| Details | binding site for residue NOS A 301 |
| Chain | Residue |
| A | GLY45 |
| A | CYS121 |
| A | HIS142 |
| A | ARG262 |
| A | ZN303 |
| A | HOH401 |
| A | HOH431 |
| A | HOH438 |
| A | HOH450 |
| A | HOH526 |
| A | HOH567 |
| A | LEU46 |
| A | HIS47 |
| A | VAL48 |
| A | ARG59 |
| A | CYS76 |
| A | GLN78 |
| A | HIS80 |
| A | PHE99 |
| site_id | AC2 |
| Number of Residues | 5 |
| Details | binding site for residue ZN A 302 |
| Chain | Residue |
| A | CYS182 |
| A | CYS183 |
| A | CYS242 |
| A | SER244 |
| A | CYS245 |
| site_id | AC3 |
| Number of Residues | 4 |
| Details | binding site for residue ZN A 303 |
| Chain | Residue |
| A | HIS80 |
| A | CYS125 |
| A | HIS142 |
| A | NOS301 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 2 |
| Details | Binding site: {"evidences":[{"source":"PubMed","id":"31978345","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"6T1B","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI2 |
| Number of Residues | 3 |
| Details | Binding site: {"evidences":[{"source":"PubMed","id":"31978345","evidenceCode":"ECO:0000305"},{"source":"PDB","id":"6T1B","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI3 |
| Number of Residues | 4 |
| Details | Binding site: {"evidences":[{"source":"PubMed","id":"31978345","evidenceCode":"ECO:0000269"},{"source":"Reference","evidenceCode":"ECO:0000269","citation":{"citationType":"submission","publicationDate":"MAY-2004","submissionDatabase":"PDB data bank","title":"1.8 A crystal structure of an uncharacterized B. stearothermophilus protein.","authors":["Minasov G.","Shuvalova L.","Mondragon A.","Taneja B.","Moy S.F.","Collart F.R.","Anderson W.F."]}},{"source":"PDB","id":"1T8H","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"6T0Y","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"6T1B","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
