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6SYE

Crystal structure of orthorhombic lysozyme in presence of the dye bromophenol blue at pH 7.0

Functional Information from GO Data
ChainGOidnamespacecontents
A0003796molecular_functionlysozyme activity
A0003824molecular_functioncatalytic activity
A0005515molecular_functionprotein binding
A0005576cellular_componentextracellular region
A0005615cellular_componentextracellular space
A0005737cellular_componentcytoplasm
A0005783cellular_componentendoplasmic reticulum
A0016231molecular_functionbeta-N-acetylglucosaminidase activity
A0016787molecular_functionhydrolase activity
A0016798molecular_functionhydrolase activity, acting on glycosyl bonds
A0016998biological_processcell wall macromolecule catabolic process
A0031640biological_processkilling of cells of another organism
A0042742biological_processdefense response to bacterium
A0042802molecular_functionidentical protein binding
A0050829biological_processdefense response to Gram-negative bacterium
A0050830biological_processdefense response to Gram-positive bacterium
A0051672biological_processobsolete catabolism by organism of cell wall peptidoglycan in other organism
Functional Information from PDB Data
site_idAC1
Number of Residues5
Detailsbinding site for residue CL A 201
ChainResidue
AASN65
AASP66
ASER81
AARG125
AHOH417

site_idAC2
Number of Residues12
Detailsbinding site for residue LYE A 202
ChainResidue
AGLY126
AGLY126
ACYS127
AARG128
ALYE203
AHOH312
AHOH337
AHOH341
ALYS13
AGLN121
AILE124
AARG125

site_idAC3
Number of Residues17
Detailsbinding site for residue LYE A 203
ChainResidue
AVAL2
AGLY4
AARG5
ACYS6
AGLU7
ALYS13
AARG128
ALEU129
ALYE202
AHOH303
AHOH327
AHOH341
AHOH358
AHOH361
AHOH372
AHOH391
AHOH434

site_idAC4
Number of Residues12
Detailsbinding site for Ligand residues IAS A 101 through GLY A 102 bound to SER A 100
ChainResidue
ATHR47
AASP48
ALYS97
AILE98
AVAL99
ASER100
AASN103
AGLY104
AALA107
AHOH302
AHOH382
AHOH404

Functional Information from PROSITE/UniProt
site_idPS00128
Number of Residues19
DetailsGLYCOSYL_HYDROL_F22_1 Glycosyl hydrolases family 22 (GH22) domain signature. CnipCsaLlssDItasvnC
ChainResidueDetails
ACYS76-CYS94

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsACT_SITE:
ChainResidueDetails
AGLU35
AASP52

site_idSWS_FT_FI2
Number of Residues1
DetailsBINDING:
ChainResidueDetails
AIAS101

Catalytic Information from CSA
site_idMCSA1
Number of Residues6
DetailsM-CSA 203
ChainResidueDetails
AGLU35hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor
AASN46
AASP48
ASER50
AASP52covalently attached, electrostatic stabiliser, nucleofuge, nucleophile, polar/non-polar interaction
AASN59

238268

PDB entries from 2025-07-02

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