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6SMZ

Crystal structure of SLA Reductase YihU from E. Coli in complex with NADH

Functional Information from GO Data
ChainGOidnamespacecontents
A0009407biological_processtoxin catabolic process
A0016054biological_processorganic acid catabolic process
A0016491molecular_functionoxidoreductase activity
A0016616molecular_functionoxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
A0032991cellular_componentprotein-containing complex
A0042802molecular_functionidentical protein binding
A0047577molecular_function4-hydroxybutyrate dehydrogenase activity
A0050661molecular_functionNADP binding
A0051287molecular_functionNAD binding
A0051289biological_processprotein homotetramerization
A0061596molecular_function3-sulfolactaldehyde reductase activity
A0061720biological_process6-sulfoquinovose(1-) catabolic process to glycerone phosphate and 3-sulfolactaldehyde
A1902777biological_process6-sulfoquinovose(1-) catabolic process
B0009407biological_processtoxin catabolic process
B0016054biological_processorganic acid catabolic process
B0016491molecular_functionoxidoreductase activity
B0016616molecular_functionoxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
B0032991cellular_componentprotein-containing complex
B0042802molecular_functionidentical protein binding
B0047577molecular_function4-hydroxybutyrate dehydrogenase activity
B0050661molecular_functionNADP binding
B0051287molecular_functionNAD binding
B0051289biological_processprotein homotetramerization
B0061596molecular_function3-sulfolactaldehyde reductase activity
B0061720biological_process6-sulfoquinovose(1-) catabolic process to glycerone phosphate and 3-sulfolactaldehyde
B1902777biological_process6-sulfoquinovose(1-) catabolic process
C0009407biological_processtoxin catabolic process
C0016054biological_processorganic acid catabolic process
C0016491molecular_functionoxidoreductase activity
C0016616molecular_functionoxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
C0032991cellular_componentprotein-containing complex
C0042802molecular_functionidentical protein binding
C0047577molecular_function4-hydroxybutyrate dehydrogenase activity
C0050661molecular_functionNADP binding
C0051287molecular_functionNAD binding
C0051289biological_processprotein homotetramerization
C0061596molecular_function3-sulfolactaldehyde reductase activity
C0061720biological_process6-sulfoquinovose(1-) catabolic process to glycerone phosphate and 3-sulfolactaldehyde
C1902777biological_process6-sulfoquinovose(1-) catabolic process
D0009407biological_processtoxin catabolic process
D0016054biological_processorganic acid catabolic process
D0016491molecular_functionoxidoreductase activity
D0016616molecular_functionoxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
D0032991cellular_componentprotein-containing complex
D0042802molecular_functionidentical protein binding
D0047577molecular_function4-hydroxybutyrate dehydrogenase activity
D0050661molecular_functionNADP binding
D0051287molecular_functionNAD binding
D0051289biological_processprotein homotetramerization
D0061596molecular_function3-sulfolactaldehyde reductase activity
D0061720biological_process6-sulfoquinovose(1-) catabolic process to glycerone phosphate and 3-sulfolactaldehyde
D1902777biological_process6-sulfoquinovose(1-) catabolic process
Functional Information from PDB Data
site_idAC1
Number of Residues24
Detailsbinding site for residue NAD A 401
ChainResidue
AGLY10
AVAL74
ASER95
ATHR96
AVAL121
AARG123
AHOH509
AHOH510
AHOH526
AHOH534
AHOH562
AGLN11
AHOH563
BHOH511
BHOH514
BHOH568
BHOH585
AMET12
AGLY13
APHE30
AASP31
AVAL32
AMET64
ALEU65

site_idAC2
Number of Residues25
Detailsbinding site for residue NAD C 401
ChainResidue
CGLY10
CGLN11
CMET12
CGLY13
CPHE30
CASP31
CVAL32
CMET64
CLEU65
CVAL74
CSER95
CTHR96
CVAL121
CARG123
CHOH511
CHOH518
CHOH524
CHOH525
CHOH537
CHOH538
CHOH552
CHOH597
DHOH523
DHOH530
DHOH612

site_idAC3
Number of Residues20
Detailsbinding site for residue NAD B 401
ChainResidue
AHOH608
BGLY10
BGLN11
BMET12
BASP31
BVAL32
BMET64
BLEU65
BVAL74
BSER95
BTHR96
BVAL121
BARG123
BHOH503
BHOH512
BHOH534
BHOH536
BHOH539
BHOH556
BHOH580

site_idAC4
Number of Residues18
Detailsbinding site for residue NAD D 401
ChainResidue
DGLY10
DGLN11
DMET12
DPHE30
DASP31
DVAL32
DMET64
DLEU65
DVAL74
DTHR96
DVAL121
DARG123
DLYS171
DHOH505
DHOH508
DHOH509
DHOH546
DHOH557

Functional Information from PROSITE/UniProt
site_idPS00895
Number of Residues14
Details3_HYDROXYISOBUT_DH 3-hydroxyisobutyrate dehydrogenase signature. FIGLGqMGspMAsN
ChainResidueDetails
APHE6-ASN19

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues4
DetailsACT_SITE: ACT_SITE => ECO:0000255|HAMAP-Rule:MF_01913, ECO:0000305|DOI:10.1021/acscatal.9b04427
ChainResidueDetails
ALYS171
CLYS171
BLYS171
DLYS171

site_idSWS_FT_FI2
Number of Residues16
DetailsBINDING: BINDING => ECO:0000255|HAMAP-Rule:MF_01913, ECO:0000269|DOI:10.1021/acscatal.9b04427, ECO:0000312|PDB:6SMY, ECO:0000312|PDB:6SMZ
ChainResidueDetails
AGLN11
BASP31
BLEU65
BTHR96
DGLN11
DASP31
DLEU65
DTHR96
AASP31
ALEU65
ATHR96
CGLN11
CASP31
CLEU65
CTHR96
BGLN11

site_idSWS_FT_FI3
Number of Residues12
DetailsBINDING: BINDING => ECO:0000255|HAMAP-Rule:MF_01913, ECO:0000269|DOI:10.1021/acscatal.9b04427, ECO:0000312|PDB:6SMY
ChainResidueDetails
AARG123
DARG123
DASN174
DLYS240
AASN174
ALYS240
CARG123
CASN174
CLYS240
BARG123
BASN174
BLYS240

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PDB entries from 2024-07-10

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