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6SMH

Cryo-electron microscopy structure of a RbcL-Raf1 supercomplex from Synechococcus elongatus PCC 7942

Functional Information from GO Data
ChainGOidnamespacecontents
A0000287molecular_functionmagnesium ion binding
A0004497molecular_functionmonooxygenase activity
A0009853biological_processphotorespiration
A0015977biological_processcarbon fixation
A0015979biological_processphotosynthesis
A0016829molecular_functionlyase activity
A0016984molecular_functionribulose-bisphosphate carboxylase activity
A0019253biological_processreductive pentose-phosphate cycle
A0031470cellular_componentcarboxysome
A0046872molecular_functionmetal ion binding
B0000287molecular_functionmagnesium ion binding
B0004497molecular_functionmonooxygenase activity
B0009853biological_processphotorespiration
B0015977biological_processcarbon fixation
B0015979biological_processphotosynthesis
B0016829molecular_functionlyase activity
B0016984molecular_functionribulose-bisphosphate carboxylase activity
B0019253biological_processreductive pentose-phosphate cycle
B0031470cellular_componentcarboxysome
B0046872molecular_functionmetal ion binding
C0000287molecular_functionmagnesium ion binding
C0004497molecular_functionmonooxygenase activity
C0009853biological_processphotorespiration
C0015977biological_processcarbon fixation
C0015979biological_processphotosynthesis
C0016829molecular_functionlyase activity
C0016984molecular_functionribulose-bisphosphate carboxylase activity
C0019253biological_processreductive pentose-phosphate cycle
C0031470cellular_componentcarboxysome
C0046872molecular_functionmetal ion binding
D0000287molecular_functionmagnesium ion binding
D0004497molecular_functionmonooxygenase activity
D0009853biological_processphotorespiration
D0015977biological_processcarbon fixation
D0015979biological_processphotosynthesis
D0016829molecular_functionlyase activity
D0016984molecular_functionribulose-bisphosphate carboxylase activity
D0019253biological_processreductive pentose-phosphate cycle
D0031470cellular_componentcarboxysome
D0046872molecular_functionmetal ion binding
E0000287molecular_functionmagnesium ion binding
E0004497molecular_functionmonooxygenase activity
E0009853biological_processphotorespiration
E0015977biological_processcarbon fixation
E0015979biological_processphotosynthesis
E0016829molecular_functionlyase activity
E0016984molecular_functionribulose-bisphosphate carboxylase activity
E0019253biological_processreductive pentose-phosphate cycle
E0031470cellular_componentcarboxysome
E0046872molecular_functionmetal ion binding
F0000287molecular_functionmagnesium ion binding
F0004497molecular_functionmonooxygenase activity
F0009853biological_processphotorespiration
F0015977biological_processcarbon fixation
F0015979biological_processphotosynthesis
F0016829molecular_functionlyase activity
F0016984molecular_functionribulose-bisphosphate carboxylase activity
F0019253biological_processreductive pentose-phosphate cycle
F0031470cellular_componentcarboxysome
F0046872molecular_functionmetal ion binding
G0000287molecular_functionmagnesium ion binding
G0004497molecular_functionmonooxygenase activity
G0009853biological_processphotorespiration
G0015977biological_processcarbon fixation
G0015979biological_processphotosynthesis
G0016829molecular_functionlyase activity
G0016984molecular_functionribulose-bisphosphate carboxylase activity
G0019253biological_processreductive pentose-phosphate cycle
G0031470cellular_componentcarboxysome
G0046872molecular_functionmetal ion binding
H0000287molecular_functionmagnesium ion binding
H0004497molecular_functionmonooxygenase activity
H0009853biological_processphotorespiration
H0015977biological_processcarbon fixation
H0015979biological_processphotosynthesis
H0016829molecular_functionlyase activity
H0016984molecular_functionribulose-bisphosphate carboxylase activity
H0019253biological_processreductive pentose-phosphate cycle
H0031470cellular_componentcarboxysome
H0046872molecular_functionmetal ion binding
Functional Information from PROSITE/UniProt
site_idPS00157
Number of Residues9
DetailsRUBISCO_LARGE Ribulose bisphosphate carboxylase large chain active site. GlDFtKdDE
ChainResidueDetails
AGLY193-GLU201

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues16
DetailsACT_SITE: Proton acceptor => ECO:0000255|HAMAP-Rule:MF_01338
ChainResidueDetails
ALYS172
EHIS291
FLYS172
FHIS291
GLYS172
GHIS291
HLYS172
HHIS291
AHIS291
BLYS172
BHIS291
CLYS172
CHIS291
DLYS172
DHIS291
ELYS172

site_idSWS_FT_FI2
Number of Residues8
DetailsBINDING: in homodimeric partner => ECO:0000255|HAMAP-Rule:MF_01338
ChainResidueDetails
AASN120
BASN120
CASN120
DASN120
EASN120
FASN120
GASN120
HASN120

site_idSWS_FT_FI3
Number of Residues56
DetailsBINDING: BINDING => ECO:0000255|HAMAP-Rule:MF_01338
ChainResidueDetails
ATHR170
BASP200
BGLU201
BARG292
BHIS324
BSER376
CTHR170
CLYS174
CASP200
CGLU201
CARG292
ALYS174
CHIS324
CSER376
DTHR170
DLYS174
DASP200
DGLU201
DARG292
DHIS324
DSER376
ETHR170
AASP200
ELYS174
EASP200
EGLU201
EARG292
EHIS324
ESER376
FTHR170
FLYS174
FASP200
FGLU201
AGLU201
FARG292
FHIS324
FSER376
GTHR170
GLYS174
GASP200
GGLU201
GARG292
GHIS324
GSER376
AARG292
HTHR170
HLYS174
HASP200
HGLU201
HARG292
HHIS324
HSER376
AHIS324
ASER376
BTHR170
BLYS174

site_idSWS_FT_FI4
Number of Residues8
DetailsBINDING: via carbamate group => ECO:0000255|HAMAP-Rule:MF_01338
ChainResidueDetails
ALYS198
BLYS198
CLYS198
DLYS198
ELYS198
FLYS198
GLYS198
HLYS198

site_idSWS_FT_FI5
Number of Residues8
DetailsSITE: Transition state stabilizer => ECO:0000255|HAMAP-Rule:MF_01338
ChainResidueDetails
ALYS331
BLYS331
CLYS331
DLYS331
ELYS331
FLYS331
GLYS331
HLYS331

site_idSWS_FT_FI6
Number of Residues8
DetailsMOD_RES: N6-carboxylysine => ECO:0000255|HAMAP-Rule:MF_01338
ChainResidueDetails
ALYS198
BLYS198
CLYS198
DLYS198
ELYS198
FLYS198
GLYS198
HLYS198

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PDB entries from 2024-10-30

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