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6SIY

PaaK family AMP-ligase with AMP and substrate

Functional Information from GO Data
ChainGOidnamespacecontents
A0000166molecular_functionnucleotide binding
A0016874molecular_functionligase activity
A0046872molecular_functionmetal ion binding
B0000166molecular_functionnucleotide binding
B0016874molecular_functionligase activity
B0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues9
Detailsbinding site for residue 3HA A 501
ChainResidue
ALEU138
AALA211
AALA212
AGLU235
ATYR236
AGLY237
AAMP502
A3HA508
BLYS418

site_idAC2
Number of Residues18
Detailsbinding site for residue AMP A 502
ChainResidue
ASER87
ASER88
AALA212
AGLU213
APRO214
AGLU234
AGLU235
ATYR236
AGLY237
ASER238
ATHR239
AGLU240
AASP299
AVAL319
A3HA501
A3HA508
AHOH646
BLYS418

site_idAC3
Number of Residues4
Detailsbinding site for residue ZN A 503
ChainResidue
ACYS248
AHIS254
ACYS308
ACYS310

site_idAC4
Number of Residues5
Detailsbinding site for residue EDO A 504
ChainResidue
ASER163
AARG167
AALA194
AHOH602
AHOH609

site_idAC5
Number of Residues6
Detailsbinding site for residue EDO A 505
ChainResidue
AGLU351
APHE354
AGLU369
AALA370
APRO371
AHOH632

site_idAC6
Number of Residues7
Detailsbinding site for residue EDO A 507
ChainResidue
AGLY195
ALEU196
AARG197
AASP201
APRO347
AALA348
AALA349

site_idAC7
Number of Residues11
Detailsbinding site for residue 3HA A 508
ChainResidue
ATHR128
APRO129
ATHR135
AARG156
AASN180
AALA212
A3HA501
AAMP502
AHOH601
AHOH650
BLYS418

site_idAC8
Number of Residues7
Detailsbinding site for residue MG A 509
ChainResidue
AARG78
AGLU79
ALEU81
BPRO120
BGLY147
BALA148
BTHR149

site_idAC9
Number of Residues7
Detailsbinding site for residue MG A 510
ChainResidue
APRO120
AGLY147
AALA148
ATHR149
BARG78
BGLU79
BLEU81

site_idAD1
Number of Residues22
Detailsbinding site for residue AMP B 501
ChainResidue
ALYS418
BSER87
BSER88
BALA212
BGLU213
BPRO214
BGLU234
BGLU235
BTYR236
BGLY237
BSER238
BTHR239
BGLU240
BASP299
BVAL319
B3HA502
BMG503
B3HA507
BHOH607
BHOH631
BHOH678
BHOH679

site_idAD2
Number of Residues11
Detailsbinding site for residue 3HA B 502
ChainResidue
BALA211
BGLU235
BGLY237
BSER238
BTHR239
BTHR243
BAMP501
B3HA507
ALYS418
BLEU138
BTRP178

site_idAD3
Number of Residues4
Detailsbinding site for residue MG B 503
ChainResidue
BSER87
BGLU240
BAMP501
BHOH631

site_idAD4
Number of Residues4
Detailsbinding site for residue ZN B 504
ChainResidue
BCYS248
BHIS254
BCYS308
BCYS310

site_idAD5
Number of Residues2
Detailsbinding site for residue EDO B 505
ChainResidue
BVAL218
BARG338

site_idAD6
Number of Residues3
Detailsbinding site for residue PEG B 506
ChainResidue
BARG356
BTHR403
BTHR403

site_idAD7
Number of Residues9
Detailsbinding site for residue 3HA B 507
ChainResidue
BTHR128
BTHR135
BARG156
BASN180
BALA212
BAMP501
B3HA502
BHOH617
BHOH636

site_idAD8
Number of Residues4
Detailsbinding site for residue PEG B 508
ChainResidue
BARG388
BARG388
BHOH623
BHOH623

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PDB entries from 2024-07-17

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