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6SIT

Pseudo-atomic crystal structure of the desmoglein 2 - human adenovirus serotype 3 fibre knob complex

Functional Information from GO Data
ChainGOidnamespacecontents
A0007155biological_processcell adhesion
A0019028cellular_componentviral capsid
A0019058biological_processviral life cycle
A0019062biological_processvirion attachment to host cell
D0005509molecular_functioncalcium ion binding
D0005886cellular_componentplasma membrane
D0007155biological_processcell adhesion
D0007156biological_processhomophilic cell adhesion via plasma membrane adhesion molecules
D0016020cellular_componentmembrane
Functional Information from PDB Data
site_idAC1
Number of Residues6
Detailsbinding site for residue CA D 401
ChainResidue
DASN104
DASN106
DASP136
DASP138
DASN144
DASP194

site_idAC2
Number of Residues6
Detailsbinding site for residue CA D 402
ChainResidue
DASP215
DVAL216
DASP218
DGLU121
DARG180
DGLU181

site_idAC3
Number of Residues4
Detailsbinding site for residue CA D 403
ChainResidue
DGLU121
DASP179
DGLU181
DASP218

site_idAC4
Number of Residues6
Detailsbinding site for residue CA D 404
ChainResidue
DASN217
DASN219
DASP248
DASP250
DASN256
DASN307

site_idAC5
Number of Residues5
Detailsbinding site for residue CA D 405
ChainResidue
DGLU234
DGLU294
DASN332
DVAL333
DGLU335

site_idAC6
Number of Residues4
Detailsbinding site for residue CA D 406
ChainResidue
DGLU234
DASP292
DGLU294
DGLU335

Functional Information from PROSITE/UniProt
site_idPS00232
Number of Residues11
DetailsCADHERIN_1 Cadherin domain signature. IrIlDvNDNiP
ChainResidueDetails
DILE211-PRO221

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsCARBOHYD: N-linked (GlcNAc...) asparagine => ECO:0000269|PubMed:16335952, ECO:0000269|PubMed:19159218, ECO:0000269|PubMed:19349973
ChainResidueDetails
DASN133

site_idSWS_FT_FI2
Number of Residues1
DetailsCARBOHYD: N-linked (GlcNAc...) asparagine => ECO:0000255
ChainResidueDetails
DASN260

218500

PDB entries from 2024-04-17

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