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6SDK

Crystal structure of bacterial ParB dimer bound to CDP

Functional Information from GO Data
ChainGOidnamespacecontents
A0003677molecular_functionDNA binding
B0003677molecular_functionDNA binding
C0003677molecular_functionDNA binding
D0003677molecular_functionDNA binding
Functional Information from PDB Data
site_idAC1
Number of Residues21
Detailsbinding site for residue CDP A 301
ChainResidue
AARG39
AARG79
AARG80
AASN112
AARG115
ACA302
AHOH413
AHOH436
AHOH446
BGLU111
BGLN114
ALEU50
BARG115
BGLU116
ASER53
AGLY58
AILE59
ALEU60
AGLN61
AGLY77
AGLU78

site_idAC2
Number of Residues6
Detailsbinding site for residue CA A 302
ChainResidue
AGLU111
AASN112
ACDP301
AHOH413
AHOH436
AHOH499

site_idAC3
Number of Residues4
Detailsbinding site for residue CA A 303
ChainResidue
AASN34
AGLN37
AGLY77
AGLU78

site_idAC4
Number of Residues21
Detailsbinding site for residue CDP B 301
ChainResidue
AGLU111
AGLN114
AARG115
AGLU116
BARG39
BLEU50
BSER53
BGLY58
BILE59
BLEU60
BGLN61
BGLY77
BGLU78
BARG79
BARG80
BASN112
BARG115
BCA302
BHOH408
BHOH411
BHOH430

site_idAC5
Number of Residues6
Detailsbinding site for residue CA B 302
ChainResidue
BGLU111
BASN112
BCDP301
BHOH408
BHOH411
BHOH475

site_idAC6
Number of Residues4
Detailsbinding site for residue CA B 303
ChainResidue
BASN34
BGLN37
BGLY77
BGLU78

site_idAC7
Number of Residues23
Detailsbinding site for residue CDP C 301
ChainResidue
CARG39
CLEU50
CSER53
CVAL54
CGLY58
CILE59
CLEU60
CGLN61
CGLY77
CGLU78
CARG79
CARG80
CASN112
CARG115
CCA302
CHOH417
CHOH427
CHOH448
CHOH466
DGLU111
DGLN114
DARG115
DGLU116

site_idAC8
Number of Residues6
Detailsbinding site for residue CA C 302
ChainResidue
CGLU111
CASN112
CCDP301
CHOH417
CHOH427
CHOH477

site_idAC9
Number of Residues4
Detailsbinding site for residue CA C 303
ChainResidue
CASN34
CGLN37
CGLY77
CGLU78

site_idAD1
Number of Residues20
Detailsbinding site for residue CDP D 301
ChainResidue
DARG39
DSER53
DGLY58
DILE59
DLEU60
DGLN61
DGLY77
DGLU78
DARG79
DARG80
DASN112
DARG115
DCA302
DHOH402
DHOH447
DHOH453
CGLU111
CGLN114
CARG115
CGLU116

site_idAD2
Number of Residues6
Detailsbinding site for residue CA D 302
ChainResidue
DGLU111
DASN112
DCDP301
DHOH402
DHOH453
DHOH464

site_idAD3
Number of Residues4
Detailsbinding site for residue CA D 303
ChainResidue
DASN34
DGLN37
DGLY77
DGLU78

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues76
DetailsDNA_BIND: H-T-H motif => ECO:0000255
ChainResidueDetails
AGLU139-LEU158
BGLU139-LEU158
CGLU139-LEU158
DGLU139-LEU158

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PDB entries from 2025-06-11

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