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6S7F

Human CD73 (5'-nucleotidase) in complex with PSB12379 (an AOPCP derivative) in the closed state

Functional Information from GO Data
ChainGOidnamespacecontents
A0000166molecular_functionnucleotide binding
A0002953molecular_function5'-deoxynucleotidase activity
A0005515molecular_functionprotein binding
A0005654cellular_componentnucleoplasm
A0005829cellular_componentcytosol
A0005886cellular_componentplasma membrane
A0006196biological_processAMP catabolic process
A0006259biological_processDNA metabolic process
A0007159biological_processleukocyte cell-cell adhesion
A0008252molecular_functionnucleotidase activity
A0008253molecular_function5'-nucleotidase activity
A0008270molecular_functionzinc ion binding
A0009166biological_processnucleotide catabolic process
A0009897cellular_componentexternal side of plasma membrane
A0009986cellular_componentcell surface
A0010035biological_processobsolete response to inorganic substance
A0016020cellular_componentmembrane
A0016787molecular_functionhydrolase activity
A0016788molecular_functionhydrolase activity, acting on ester bonds
A0033198biological_processresponse to ATP
A0042802molecular_functionidentical protein binding
A0046032biological_processADP catabolic process
A0046034biological_processATP metabolic process
A0046086biological_processadenosine biosynthetic process
A0046872molecular_functionmetal ion binding
A0050340molecular_functionthymidylate 5'-phosphatase activity
A0050483molecular_functionIMP 5'-nucleotidase activity
A0050484molecular_functionGMP 5'-nucleotidase activity
A0050728biological_processnegative regulation of inflammatory response
A0055074biological_processcalcium ion homeostasis
A0070062cellular_componentextracellular exosome
A0098552cellular_componentside of membrane
A0106411molecular_functionXMP 5'-nucleosidase activity
A0110148biological_processobsolete biomineralization
A0140928biological_processinhibition of non-skeletal tissue mineralization
Functional Information from PDB Data
site_idAC1
Number of Residues5
Detailsbinding site for residue ZN A 601
ChainResidue
AASP36
AHIS38
AASP85
AKYK604
AHOH741

site_idAC2
Number of Residues5
Detailsbinding site for residue ZN A 602
ChainResidue
AKYK604
AASP85
AASN117
AHIS220
AHIS243

site_idAC3
Number of Residues5
Detailsbinding site for residue CA A 603
ChainResidue
AASN213
AASP237
AGLY298
AHOH706
AHOH863

site_idAC4
Number of Residues27
Detailsbinding site for residue KYK A 604
ChainResidue
AHIS38
AASP85
AASN117
AHIS118
AASP121
ALEU184
ASER185
AHIS243
AASN245
AARG354
AASN390
AGLY392
AGLY393
AARG395
APHE417
AGLY447
APHE500
AASP506
AZN601
AZN602
AHOH731
AHOH741
AHOH748
AHOH800
AHOH812
AHOH819
AHOH835

Functional Information from PROSITE/UniProt
site_idPS00785
Number of Residues13
Details5_NUCLEOTIDASE_1 5'-nucleotidase signature 1. LtILHTnDvHSrL
ChainResidueDetails
ALEU29-LEU41

site_idPS00786
Number of Residues12
Details5_NUCLEOTIDASE_2 5'-nucleotidase signature 2. YdamaLGNHEFD
ChainResidueDetails
ATYR110-ASP121

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsBINDING: BINDING => ECO:0000269|PubMed:22997138, ECO:0000269|PubMed:23142347, ECO:0000269|PubMed:34403084, ECO:0007744|PDB:4H1S, ECO:0007744|PDB:7P9N
ChainResidueDetails
AASP36

site_idSWS_FT_FI2
Number of Residues1
DetailsBINDING: BINDING => ECO:0000269|PubMed:22997138, ECO:0000269|PubMed:23142347, ECO:0000269|PubMed:34403084, ECO:0007744|PDB:4H1S, ECO:0007744|PDB:4H1Y, ECO:0007744|PDB:4H2B, ECO:0007744|PDB:4H2G, ECO:0007744|PDB:4H2I, ECO:0007744|PDB:7P9N
ChainResidueDetails
AHIS38

site_idSWS_FT_FI3
Number of Residues4
DetailsBINDING: BINDING => ECO:0000269|PubMed:22997138, ECO:0000269|PubMed:23142347, ECO:0000269|PubMed:34403084, ECO:0007744|PDB:4H1S, ECO:0007744|PDB:4H1Y, ECO:0007744|PDB:4H2B, ECO:0007744|PDB:4H2F, ECO:0007744|PDB:4H2G, ECO:0007744|PDB:4H2I, ECO:0007744|PDB:7P9N
ChainResidueDetails
AASP85
AASN117
AHIS220
AHIS243

site_idSWS_FT_FI4
Number of Residues6
DetailsBINDING: BINDING => ECO:0000269|PubMed:34403084, ECO:0007744|PDB:7PBA
ChainResidueDetails
AARG354
AASN390
AARG395
APHE417
APHE500
AASP506

site_idSWS_FT_FI5
Number of Residues1
DetailsSITE: Transition state stabilizer => ECO:0000269|PubMed:23142347
ChainResidueDetails
AHIS118

site_idSWS_FT_FI6
Number of Residues1
DetailsSITE: Transition state stabilizer => ECO:0000305|PubMed:23142347
ChainResidueDetails
AASP121

site_idSWS_FT_FI7
Number of Residues1
DetailsLIPID: GPI-anchor amidated serine => ECO:0000269|PubMed:2129526
ChainResidueDetails
ASER549

site_idSWS_FT_FI8
Number of Residues1
DetailsCARBOHYD: N-linked (GlcNAc...) asparagine => ECO:0000255
ChainResidueDetails
AASP53

site_idSWS_FT_FI9
Number of Residues1
DetailsCARBOHYD: N-linked (GlcNAc...) asparagine => ECO:0000269|PubMed:19159218, ECO:0000269|PubMed:22997138, ECO:0000269|PubMed:23142347
ChainResidueDetails
AASP311

site_idSWS_FT_FI10
Number of Residues1
DetailsCARBOHYD: N-linked (GlcNAc...) asparagine => ECO:0000269|PubMed:19159218, ECO:0000269|PubMed:19349973
ChainResidueDetails
AASP333

site_idSWS_FT_FI11
Number of Residues1
DetailsCARBOHYD: N-linked (GlcNAc...) asparagine => ECO:0000269|PubMed:19159218
ChainResidueDetails
AASP403

222624

PDB entries from 2024-07-17

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