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6RZR

Structure of IMP-13 metallo-beta-lactamase complexed with hydrolysed imipenem

Functional Information from GO Data
ChainGOidnamespacecontents
A0008270molecular_functionzinc ion binding
A0008800molecular_functionbeta-lactamase activity
A0016787molecular_functionhydrolase activity
A0017001biological_processantibiotic catabolic process
A0042597cellular_componentperiplasmic space
A0046677biological_processresponse to antibiotic
A0046872molecular_functionmetal ion binding
B0008270molecular_functionzinc ion binding
B0008800molecular_functionbeta-lactamase activity
B0016787molecular_functionhydrolase activity
B0017001biological_processantibiotic catabolic process
B0042597cellular_componentperiplasmic space
B0046677biological_processresponse to antibiotic
B0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues4
Detailsbinding site for residue ZN A 301
ChainResidue
AHIS77
AHIS79
AHIS139
A8YF311

site_idAC2
Number of Residues4
Detailsbinding site for residue ZN A 302
ChainResidue
AASP81
ACYS158
AHIS197
A8YF311

site_idAC3
Number of Residues7
Detailsbinding site for residue EDO A 303
ChainResidue
APRO135
AGLY136
AILE182
AHOH439
BTRP28
B8YF307
ATYR134

site_idAC4
Number of Residues3
Detailsbinding site for residue EDO A 304
ChainResidue
AVAL64
AGLU69
AILE70

site_idAC5
Number of Residues4
Detailsbinding site for residue EDO A 305
ChainResidue
ATRP147
APRO149
ALYS152
AEDO306

site_idAC6
Number of Residues3
Detailsbinding site for residue EDO A 306
ChainResidue
AEDO305
AHOH409
AHOH443

site_idAC7
Number of Residues6
Detailsbinding site for residue EDO A 307
ChainResidue
AGLY15
ALEU39
ALEU148
AGLU150
ASER151
AHOH436

site_idAC8
Number of Residues6
Detailsbinding site for residue EDO A 308
ChainResidue
AASN103
AGLN113
AALA114
ALYS115
ASER117
AHOH403

site_idAC9
Number of Residues3
Detailsbinding site for residue EDO A 309
ChainResidue
AGLN141
AASP170
AALA171

site_idAD1
Number of Residues4
Detailsbinding site for residue EDO A 310
ChainResidue
ALEU7
ALYS58
ATRP62
AHOH421

site_idAD2
Number of Residues14
Detailsbinding site for residue 8YF A 311
ChainResidue
AHIS77
AHIS79
ASER80
AASP81
AHIS139
ACYS158
ALYS161
ALEU165
AGLY166
AASN167
AHIS197
AZN301
AZN302
AHOH497

site_idAD3
Number of Residues4
Detailsbinding site for residue ZN B 301
ChainResidue
BHIS77
BHIS79
BHIS139
B8YF307

site_idAD4
Number of Residues4
Detailsbinding site for residue ZN B 302
ChainResidue
BASP81
BCYS158
BHIS197
B8YF307

site_idAD5
Number of Residues7
Detailsbinding site for residue EDO B 303
ChainResidue
ATRP28
BVAL121
BPHE133
BTYR134
BPRO135
BGLY136
BHOH414

site_idAD6
Number of Residues5
Detailsbinding site for residue EDO B 304
ChainResidue
ASER99
AHOH418
BVAL30
BTHR32
BHOH443

site_idAD7
Number of Residues2
Detailsbinding site for residue EDO B 305
ChainResidue
BTYR116
BSER117

site_idAD8
Number of Residues3
Detailsbinding site for residue EDO B 306
ChainResidue
BHIS34
BGLU199
BLYS200

site_idAD9
Number of Residues23
Detailsbinding site for residue 8YF B 307
ChainResidue
BGLY166
BASN167
BHIS197
BZN301
BZN302
BHOH407
BHOH423
AVAL121
AEDO303
AHOH402
BVAL25
BTRP28
BVAL30
BVAL31
BTHR32
BHIS77
BHIS79
BSER80
BASP81
BHIS139
BCYS158
BLYS161
BLEU165

Functional Information from PROSITE/UniProt
site_idPS00743
Number of Residues20
DetailsBETA_LACTAMASE_B_1 Beta-lactamases class B signature 1. IsSHfHSDstGGiewlnsq.S
ChainResidueDetails
AILE74-SER93

site_idPS00744
Number of Residues13
DetailsBETA_LACTAMASE_B_2 Beta-lactamases class B signature 2. PeskILfGgCFIK
ChainResidueDetails
APRO149-LYS161

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues12
DetailsBINDING: BINDING => ECO:0000269|PubMed:32205343, ECO:0000269|Ref.11, ECO:0007744|PDB:6R73, ECO:0007744|PDB:6R79, ECO:0007744|PDB:6RZR, ECO:0007744|PDB:6RZS, ECO:0007744|PDB:6S0H, ECO:0007744|PDB:6YI4
ChainResidueDetails
AHIS77
BHIS139
BCYS158
BHIS197
AHIS79
AASP81
AHIS139
ACYS158
AHIS197
BHIS77
BHIS79
BASP81

site_idSWS_FT_FI2
Number of Residues2
DetailsBINDING: BINDING => ECO:0000250|UniProtKB:P52699
ChainResidueDetails
ALYS161
BLYS161

site_idSWS_FT_FI3
Number of Residues2
DetailsBINDING: BINDING => ECO:0000269|PubMed:32205343
ChainResidueDetails
AASN167
BASN167

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PDB entries from 2024-07-24

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