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6RYO

Bacterial membrane enzyme structure by the in meso method at 1.9 A resolution

Functional Information from GO Data
ChainGOidnamespacecontents
A0004190molecular_functionaspartic-type endopeptidase activity
A0005886cellular_componentplasma membrane
A0006508biological_processproteolysis
A0016020cellular_componentmembrane
Functional Information from PDB Data
site_idAC1
Number of Residues9
Detailsbinding site for residue OLC A 201
ChainResidue
AVAL17
AVAL94
ALEU98
AILE134
ASER137
AOLC202
AOLC204
AOLC205
BOLC101

site_idAC2
Number of Residues5
Detailsbinding site for residue OLC A 202
ChainResidue
ALEU90
APHE91
AVAL94
AOLC201
A7PE215

site_idAC3
Number of Residues6
Detailsbinding site for residue OLC A 203
ChainResidue
AALA14
AILE19
APHE82
ASER97
APHE100
A7PE214

site_idAC4
Number of Residues8
Detailsbinding site for residue OLC A 204
ChainResidue
ATHR9
ALEU12
APHE16
APHE20
ALEU60
ASER61
APHE66
AOLC201

site_idAC5
Number of Residues5
Detailsbinding site for residue OLC A 205
ChainResidue
AILE28
APHE38
ALEU45
AOLC201
BOLC101

site_idAC6
Number of Residues4
Detailsbinding site for residue GOL A 206
ChainResidue
AILE83
ALYS84
ATYR127
AASP128

site_idAC7
Number of Residues3
Detailsbinding site for residue GOL A 207
ChainResidue
APHE129
APRO130
B7PE102

site_idAC8
Number of Residues4
Detailsbinding site for residue GOL A 208
ChainResidue
ASER37
ALYS152
A7PE210
A7PE216

site_idAC9
Number of Residues4
Detailsbinding site for residue 7PE A 209
ChainResidue
AILE74
ALEU78
APHE81
A7PE214

site_idAD1
Number of Residues4
Detailsbinding site for residue 7PE A 210
ChainResidue
APHE44
AASN89
AALA149
AGOL208

site_idAD2
Number of Residues2
Detailsbinding site for residue 7PE A 211
ChainResidue
ATHR140
BMLE1

site_idAD3
Number of Residues2
Detailsbinding site for residue 7PE A 212
ChainResidue
AASP121
ATYR127

site_idAD4
Number of Residues7
Detailsbinding site for residue 7PE A 213
ChainResidue
ALYS25
AALA29
AARG51
ATHR113
AGLU115
AVAL117
AHOH301

site_idAD5
Number of Residues6
Detailsbinding site for residue 7PE A 214
ChainResidue
AILE19
AGLN22
AVAL23
ATYR26
AOLC203
A7PE209

site_idAD6
Number of Residues7
Detailsbinding site for residue 7PE A 215
ChainResidue
AHIS2
AILE34
APHE44
ATYR88
ALEU90
APHE91
AOLC202

site_idAD7
Number of Residues7
Detailsbinding site for residue 7PE A 216
ChainResidue
AVAL111
ALEU112
ALEU150
ALEU151
ALYS152
ATHR154
AGOL208

site_idAD8
Number of Residues4
Detailsbinding site for residue ZN A 217
ChainResidue
AHIS0
AHIS2
AHIS43
AGLU115

site_idAD9
Number of Residues3
Detailsbinding site for residue 7PE A 218
ChainResidue
ATHR65
APHE68
AGOL220

site_idAE1
Number of Residues6
Detailsbinding site for residue GOL A 219
ChainResidue
AGLY62
ALYS63
AMET64
ATHR65
AGOL220
AHOH303

site_idAE2
Number of Residues4
Detailsbinding site for residue GOL A 220
ChainResidue
AHOH303
ATHR65
A7PE218
AGOL219

site_idAE3
Number of Residues13
Detailsbinding site for residue OLC B 101
ChainResidue
ALEU45
AASN52
AASP118
APHE129
APRO130
AILE131
APHE132
ATHR140
AOLC201
AOLC205
BIIL2
BSER3
BALO4

site_idAE4
Number of Residues2
Detailsbinding site for residue 7PE B 102
ChainResidue
ATRP57
AGOL207

site_idAE5
Number of Residues19
Detailsbinding site for Ligand residues ALO B 4 through SER B 3 bound to SER B 3
ChainResidue
AGLY8
ALEU12
AASN52
AGLY54
ATRP57
ALEU60
APHE67
ATHR71
AILE74
AASN106
AARG110
AVAL116
AASP118
AASN133
AASP136
ALEU139
A7PE211
AHOH306
BOLC101

Functional Information from PROSITE/UniProt
site_idPS00855
Number of Residues13
DetailsSPASE_II Signal peptidases II signature. LfAGALGNFIDRV
ChainResidueDetails
ALEU99-VAL111

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues80
DetailsTRANSMEM: Helical => ECO:0000255|HAMAP-Rule:MF_00161
ChainResidueDetails
AILE11-THR31
ALYS63-ILE83
ATYR88-ILE108
AILE131-LEU151

site_idSWS_FT_FI2
Number of Residues2
DetailsACT_SITE: ACT_SITE => ECO:0000255|HAMAP-Rule:MF_00161
ChainResidueDetails
AASP118
AASP136

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PDB entries from 2024-07-10

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