Summary Structural details Experimental details Functional details Sequence Neighbor History Downloads

6RM3

Evolutionary compaction and adaptation visualized by the structure of the dormant microsporidian ribosome

This is a non-PDB format compatible entry.

Functional Information from GO Data

Chain	GOid	namespace	contents
LA0	0003735	molecular_function	structural constituent of ribosome
LA0	0005840	cellular_component	ribosome
LA0	0006412	biological_process	translation
LB0	0003735	molecular_function	structural constituent of ribosome
LB0	0005840	cellular_component	ribosome
LB0	0006412	biological_process	translation
LBB	0003735	molecular_function	structural constituent of ribosome
LBB	0005840	cellular_component	ribosome
LBB	0006412	biological_process	translation
LC0	0003735	molecular_function	structural constituent of ribosome
LC0	0005840	cellular_component	ribosome
LC0	0006412	biological_process	translation
LCC	0003723	molecular_function	RNA binding
LD0	0003735	molecular_function	structural constituent of ribosome
LD0	0005840	cellular_component	ribosome
LD0	0006412	biological_process	translation
LD0	0008097	molecular_function	5S rRNA binding
LDD	0003735	molecular_function	structural constituent of ribosome
LDD	0005840	cellular_component	ribosome
LDD	0006412	biological_process	translation
LE0	0003735	molecular_function	structural constituent of ribosome
LE0	0005840	cellular_component	ribosome
LE0	0006412	biological_process	translation
LEE	0003735	molecular_function	structural constituent of ribosome
LEE	0005840	cellular_component	ribosome
LEE	0006412	biological_process	translation
LFF	0003735	molecular_function	structural constituent of ribosome
LFF	0005840	cellular_component	ribosome
LFF	0006412	biological_process	translation
LG0	0003723	molecular_function	RNA binding
LG0	0042254	biological_process	ribosome biogenesis
LG0	1990904	cellular_component	ribonucleoprotein complex
LGG	0003735	molecular_function	structural constituent of ribosome
LGG	0005840	cellular_component	ribosome
LGG	0006412	biological_process	translation
LH0	0003735	molecular_function	structural constituent of ribosome
LH0	0005840	cellular_component	ribosome
LH0	0006412	biological_process	translation
LH0	0019843	molecular_function	rRNA binding
LHH	0000463	biological_process	maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
LHH	0003735	molecular_function	structural constituent of ribosome
LHH	0005840	cellular_component	ribosome
LHH	0006412	biological_process	translation
LHH	0022625	cellular_component	cytosolic large ribosomal subunit
LI0	0003735	molecular_function	structural constituent of ribosome
LI0	0005840	cellular_component	ribosome
LI0	0006412	biological_process	translation
LII	0003735	molecular_function	structural constituent of ribosome
LII	0005840	cellular_component	ribosome
LII	0006412	biological_process	translation
LJ0	0003735	molecular_function	structural constituent of ribosome
LJ0	0005840	cellular_component	ribosome
LJ0	0006412	biological_process	translation
LJJ	0003735	molecular_function	structural constituent of ribosome
LJJ	0005840	cellular_component	ribosome
LJJ	0006412	biological_process	translation
LL0	0003735	molecular_function	structural constituent of ribosome
LL0	0005840	cellular_component	ribosome
LL0	0006412	biological_process	translation
LLL	0003735	molecular_function	structural constituent of ribosome
LLL	0005840	cellular_component	ribosome
LLL	0006412	biological_process	translation
LMM	0003735	molecular_function	structural constituent of ribosome
LMM	0005840	cellular_component	ribosome
LMM	0006412	biological_process	translation
LN0	0003735	molecular_function	structural constituent of ribosome
LN0	0005840	cellular_component	ribosome
LN0	0006412	biological_process	translation
LO0	0003735	molecular_function	structural constituent of ribosome
LO0	0005840	cellular_component	ribosome
LO0	0006412	biological_process	translation
LO0	0015934	cellular_component	large ribosomal subunit
LOO	0003735	molecular_function	structural constituent of ribosome
LOO	0005840	cellular_component	ribosome
LOO	0006412	biological_process	translation
LP0	0003735	molecular_function	structural constituent of ribosome
LP0	0005840	cellular_component	ribosome
LP0	0006412	biological_process	translation
LP0	0015934	cellular_component	large ribosomal subunit
LPP	0003735	molecular_function	structural constituent of ribosome
LPP	0005840	cellular_component	ribosome
LPP	0006412	biological_process	translation
LQ0	0003735	molecular_function	structural constituent of ribosome
LQ0	0005840	cellular_component	ribosome
LQ0	0006412	biological_process	translation
LR0	0003723	molecular_function	RNA binding
LR0	0003735	molecular_function	structural constituent of ribosome
LR0	0005840	cellular_component	ribosome
LR0	0006412	biological_process	translation
LR0	0022625	cellular_component	cytosolic large ribosomal subunit
LS0	0003735	molecular_function	structural constituent of ribosome
LS0	0005840	cellular_component	ribosome
LS0	0006412	biological_process	translation
LT0	0003735	molecular_function	structural constituent of ribosome
LT0	0005840	cellular_component	ribosome
LT0	0006412	biological_process	translation
LU0	0003735	molecular_function	structural constituent of ribosome
LU0	0005840	cellular_component	ribosome
LU0	0006412	biological_process	translation
LV0	0003735	molecular_function	structural constituent of ribosome
LV0	0005840	cellular_component	ribosome
LV0	0006412	biological_process	translation
LX0	0003735	molecular_function	structural constituent of ribosome
LX0	0005840	cellular_component	ribosome
LX0	0006412	biological_process	translation
LY0	0003723	molecular_function	RNA binding
LY0	0003735	molecular_function	structural constituent of ribosome
LY0	0006412	biological_process	translation
LY0	0015934	cellular_component	large ribosomal subunit
LZ0	0003735	molecular_function	structural constituent of ribosome
LZ0	0005840	cellular_component	ribosome
LZ0	0006412	biological_process	translation
SA0	0003735	molecular_function	structural constituent of ribosome
SA0	0005840	cellular_component	ribosome
SA0	0006412	biological_process	translation
SA0	0015935	cellular_component	small ribosomal subunit
SAA	0003735	molecular_function	structural constituent of ribosome
SAA	0005840	cellular_component	ribosome
SAA	0006412	biological_process	translation
SB0	0003735	molecular_function	structural constituent of ribosome
SB0	0005840	cellular_component	ribosome
SB0	0006412	biological_process	translation
SBB	0003735	molecular_function	structural constituent of ribosome
SBB	0005840	cellular_component	ribosome
SBB	0006412	biological_process	translation
SC0	0003723	molecular_function	RNA binding
SC0	0003735	molecular_function	structural constituent of ribosome
SC0	0005840	cellular_component	ribosome
SC0	0006412	biological_process	translation
SC0	0015935	cellular_component	small ribosomal subunit
SCC	0003735	molecular_function	structural constituent of ribosome
SCC	0005840	cellular_component	ribosome
SCC	0006412	biological_process	translation
SD0	0003723	molecular_function	RNA binding
SD0	0003735	molecular_function	structural constituent of ribosome
SD0	0006412	biological_process	translation
SDD	0003735	molecular_function	structural constituent of ribosome
SDD	0005840	cellular_component	ribosome
SDD	0006412	biological_process	translation
SDD	0008270	molecular_function	zinc ion binding
SE0	0003723	molecular_function	RNA binding
SE0	0003735	molecular_function	structural constituent of ribosome
SE0	0005840	cellular_component	ribosome
SE0	0006412	biological_process	translation
SEE	0003735	molecular_function	structural constituent of ribosome
SEE	0005840	cellular_component	ribosome
SEE	0006412	biological_process	translation
SF0	0003735	molecular_function	structural constituent of ribosome
SF0	0006412	biological_process	translation
SF0	0015935	cellular_component	small ribosomal subunit
SFF	0003735	molecular_function	structural constituent of ribosome
SFF	0005840	cellular_component	ribosome
SFF	0006412	biological_process	translation
SG0	0003735	molecular_function	structural constituent of ribosome
SG0	0005840	cellular_component	ribosome
SG0	0006412	biological_process	translation
SI0	0003735	molecular_function	structural constituent of ribosome
SI0	0005840	cellular_component	ribosome
SI0	0006412	biological_process	translation
SJ0	0003723	molecular_function	RNA binding
SJ0	0003735	molecular_function	structural constituent of ribosome
SJ0	0006412	biological_process	translation
SJ0	0015935	cellular_component	small ribosomal subunit
SJ0	0019843	molecular_function	rRNA binding
SL0	0003735	molecular_function	structural constituent of ribosome
SL0	0005840	cellular_component	ribosome
SL0	0006412	biological_process	translation
SN0	0003735	molecular_function	structural constituent of ribosome
SN0	0005840	cellular_component	ribosome
SN0	0006412	biological_process	translation
SO0	0003735	molecular_function	structural constituent of ribosome
SO0	0005840	cellular_component	ribosome
SO0	0006412	biological_process	translation
SP0	0003735	molecular_function	structural constituent of ribosome
SP0	0005840	cellular_component	ribosome
SP0	0006412	biological_process	translation
SQ0	0003735	molecular_function	structural constituent of ribosome
SQ0	0005840	cellular_component	ribosome
SQ0	0006412	biological_process	translation
SR0	0003735	molecular_function	structural constituent of ribosome
SR0	0005840	cellular_component	ribosome
SR0	0006412	biological_process	translation
SS0	0003676	molecular_function	nucleic acid binding
SS0	0003723	molecular_function	RNA binding
SS0	0003735	molecular_function	structural constituent of ribosome
SS0	0005840	cellular_component	ribosome
SS0	0006412	biological_process	translation
ST0	0003735	molecular_function	structural constituent of ribosome
ST0	0005840	cellular_component	ribosome
ST0	0006412	biological_process	translation
SV0	0003735	molecular_function	structural constituent of ribosome
SV0	0005840	cellular_component	ribosome
SV0	0006412	biological_process	translation
SW0	0003735	molecular_function	structural constituent of ribosome
SW0	0005840	cellular_component	ribosome
SW0	0006412	biological_process	translation
SX0	0003735	molecular_function	structural constituent of ribosome
SX0	0005840	cellular_component	ribosome
SX0	0006412	biological_process	translation
SX0	0015935	cellular_component	small ribosomal subunit
SY0	0003735	molecular_function	structural constituent of ribosome
SY0	0005840	cellular_component	ribosome
SY0	0006412	biological_process	translation

Functional Information from PROSITE/UniProt

site_id	PS00049
Number of Residues	27
Details	RIBOSOMAL_L14 Ribosomal protein L14 signature. AILVrqkkvwrre.DGthigFedNaaVL

Chain	Residue	Details
LV0	ALA85-LEU111

site_id	PS00054
Number of Residues	23
Details	RIBOSOMAL_S11 Ribosomal protein S11 signature. VrSIirS.GIkMgrieDvTPePTD

Chain	Residue	Details
SO0	VAL100-ASP122

site_id	PS00055
Number of Residues	8
Details	RIBOSOMAL_S12 Ribosomal protein S12 signature. KqPNSAvR

Chain	Residue	Details
SX0	LYS57-ARG64

site_id	PS00299
Number of Residues	26
Details	UBIQUITIN_1 Ubiquitin domain signature. KakIqDkegIPpdqQrLIFaGkqleD

Chain	Residue	Details
SFF	LYS27-ASP52

site_id	PS00474
Number of Residues	24
Details	RIBOSOMAL_L3 Ribosomal protein L3 signature. FgvdenlDviGvTkGKGftGvikR

Chain	Residue	Details
LB0	PHE205-ARG228

site_id	PS00527
Number of Residues	23
Details	RIBOSOMAL_S14 Ribosomal protein S14 signature. RaCsgfrgiifkyd.MTICRrCFR

Chain	Residue	Details
SDD	ARG34-ARG56

site_id	PS00578
Number of Residues	12
Details	RIBOSOMAL_S6E Ribosomal protein S6e signature. ITGGdDaqGfPM

Chain	Residue	Details
SG0	ILE51-MET62

site_id	PS00580
Number of Residues	21
Details	RIBOSOMAL_L32E Ribosomal protein L32e signature. FvRhhsdRynRVkps..WRKprG

Chain	Residue	Details
LEE	PHE24-GLY44

site_id	PS00585
Number of Residues	33
Details	RIBOSOMAL_S5 Ribosomal protein S5 signature. GQktsIkAvvAIGDgk.GyVGiGtfssk.DAat.AI

Chain	Residue	Details
SC0	GLY74-ILE106

site_id	PS00634
Number of Residues	33
Details	RIBOSOMAL_L30 Ribosomal protein L30 signature. ILklLrLnKtnSaVlvknnksmkrMLqlAkdYI

Chain	Residue	Details
LF0	ILE100-ILE132

site_id	PS00678
Number of Residues	15
Details	WD_REPEATS_1 Trp-Asp (WD) repeats signature. IVTGsvDcSIKLWNT

Chain	Residue	Details
SGG	ILE124-THR138
SGG	LEU171-ILE185

site_id	PS00712
Number of Residues	16
Details	RIBOSOMAL_S17E Ribosomal protein S17e signature. VqSKrVRNqIAGYvTH

Chain	Residue	Details
SR0	VAL40-HIS55

site_id	PS01077
Number of Residues	20
Details	RIBOSOMAL_L37E Ribosomal protein L37e signature. GTaSfGkKnkrn.HtlCkRCG

Chain	Residue	Details
LJJ	GLY4-GLY23

site_id	PS01082
Number of Residues	18
Details	RIBOSOMAL_L7AE Ribosomal protein L7Ae signature. CkkmnIPYaiVeSQnmLG

Chain	Residue	Details
LG0	CYS131-GLY148

site_id	PS01171
Number of Residues	26
Details	RIBOSOMAL_L21E Ribosomal protein L21e signature. GDyVtisinpsihk.GmpFkyYhGrTG

Chain	Residue	Details
LT0	GLY36-GLY61

site_id	PS01172
Number of Residues	12
Details	RIBOSOMAL_L44E Ribosomal protein L44e signature. KlTKKimLKleC

Chain	Residue	Details
LOO	LYS60-CYS71

site_id	PS01257
Number of Residues	22
Details	RIBOSOMAL_L10E Ribosomal protein L10e signature. ADRlqtGMRqSFGKPeGrvARI

Chain	Residue	Details
LI0	ALA108-ILE129

		Sequence (fasta)
		PDBx/mmCIF
		PDBML format (no-atom)
		Validation report (PDF)