6RJR
Crystal structure of a Fungal Catalase at 1.9 Angstrom
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0000166 | molecular_function | nucleotide binding |
A | 0004096 | molecular_function | catalase activity |
A | 0004601 | molecular_function | peroxidase activity |
A | 0005737 | cellular_component | cytoplasm |
A | 0005739 | cellular_component | mitochondrion |
A | 0005777 | cellular_component | peroxisome |
A | 0006979 | biological_process | response to oxidative stress |
A | 0020037 | molecular_function | heme binding |
A | 0042542 | biological_process | response to hydrogen peroxide |
A | 0042744 | biological_process | hydrogen peroxide catabolic process |
A | 0046872 | molecular_function | metal ion binding |
A | 0098869 | biological_process | cellular oxidant detoxification |
B | 0000166 | molecular_function | nucleotide binding |
B | 0004096 | molecular_function | catalase activity |
B | 0004601 | molecular_function | peroxidase activity |
B | 0005737 | cellular_component | cytoplasm |
B | 0005739 | cellular_component | mitochondrion |
B | 0005777 | cellular_component | peroxisome |
B | 0006979 | biological_process | response to oxidative stress |
B | 0020037 | molecular_function | heme binding |
B | 0042542 | biological_process | response to hydrogen peroxide |
B | 0042744 | biological_process | hydrogen peroxide catabolic process |
B | 0046872 | molecular_function | metal ion binding |
B | 0098869 | biological_process | cellular oxidant detoxification |
C | 0000166 | molecular_function | nucleotide binding |
C | 0004096 | molecular_function | catalase activity |
C | 0004601 | molecular_function | peroxidase activity |
C | 0005737 | cellular_component | cytoplasm |
C | 0005739 | cellular_component | mitochondrion |
C | 0005777 | cellular_component | peroxisome |
C | 0006979 | biological_process | response to oxidative stress |
C | 0020037 | molecular_function | heme binding |
C | 0042542 | biological_process | response to hydrogen peroxide |
C | 0042744 | biological_process | hydrogen peroxide catabolic process |
C | 0046872 | molecular_function | metal ion binding |
C | 0098869 | biological_process | cellular oxidant detoxification |
D | 0000166 | molecular_function | nucleotide binding |
D | 0004096 | molecular_function | catalase activity |
D | 0004601 | molecular_function | peroxidase activity |
D | 0005737 | cellular_component | cytoplasm |
D | 0005739 | cellular_component | mitochondrion |
D | 0005777 | cellular_component | peroxisome |
D | 0006979 | biological_process | response to oxidative stress |
D | 0020037 | molecular_function | heme binding |
D | 0042542 | biological_process | response to hydrogen peroxide |
D | 0042744 | biological_process | hydrogen peroxide catabolic process |
D | 0046872 | molecular_function | metal ion binding |
D | 0098869 | biological_process | cellular oxidant detoxification |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 24 |
Details | binding site for residue HEM A 601 |
Chain | Residue |
A | ARG61 |
A | SER207 |
A | HIS209 |
A | LEU290 |
A | PHE325 |
A | VAL341 |
A | ARG345 |
A | SER348 |
A | TYR349 |
A | ALA352 |
A | HIS353 |
A | ASN62 |
A | ARG356 |
A | HOH723 |
A | HOH759 |
A | HOH765 |
B | ASN54 |
A | HIS64 |
A | ARG101 |
A | GLY120 |
A | VAL135 |
A | ASN136 |
A | ASN137 |
A | PHE150 |
site_id | AC2 |
Number of Residues | 24 |
Details | binding site for residue NDP A 602 |
Chain | Residue |
A | HIS185 |
A | SER192 |
A | ARG194 |
A | ASN204 |
A | HIS226 |
A | LYS228 |
A | VAL293 |
A | TRP294 |
A | HIS296 |
A | GLN439 |
A | LEU443 |
A | VAL447 |
A | GLN451 |
A | HOH725 |
A | HOH727 |
A | HOH738 |
A | HOH741 |
A | HOH744 |
A | HOH748 |
A | HOH789 |
A | HOH807 |
A | HOH812 |
A | HOH825 |
A | HOH891 |
site_id | AC3 |
Number of Residues | 4 |
Details | binding site for residue GOL A 603 |
Chain | Residue |
A | ARG116 |
A | ASN238 |
A | THR242 |
A | ALA245 |
site_id | AC4 |
Number of Residues | 4 |
Details | binding site for residue GOL A 604 |
Chain | Residue |
A | LYS494 |
A | HOH732 |
A | HOH813 |
A | HOH880 |
site_id | AC5 |
Number of Residues | 3 |
Details | binding site for residue GOL A 605 |
Chain | Residue |
A | PRO452 |
A | HOH935 |
D | GLU490 |
site_id | AC6 |
Number of Residues | 8 |
Details | binding site for residue GOL A 606 |
Chain | Residue |
A | GLY110 |
A | ALA112 |
A | ALA245 |
A | PRO249 |
A | HOH972 |
B | SER111 |
B | ALA112 |
B | ALA245 |
site_id | AC7 |
Number of Residues | 8 |
Details | binding site for residue GOL A 607 |
Chain | Residue |
A | ARG145 |
A | PHE285 |
A | SER286 |
A | ASP289 |
A | SER431 |
A | ILE435 |
A | ASP436 |
A | HOH701 |
site_id | AC8 |
Number of Residues | 5 |
Details | binding site for residue GOL A 608 |
Chain | Residue |
A | PRO284 |
A | PRO295 |
A | VAL438 |
A | GLN439 |
A | ASP442 |
site_id | AC9 |
Number of Residues | 5 |
Details | binding site for residue K A 609 |
Chain | Residue |
A | PRO140 |
A | GLY208 |
A | LYS292 |
A | HOH819 |
A | HOH892 |
site_id | AD1 |
Number of Residues | 23 |
Details | binding site for residue HEM B 601 |
Chain | Residue |
B | ARG345 |
B | SER348 |
B | TYR349 |
B | ALA352 |
B | HIS353 |
B | ARG356 |
B | HOH729 |
B | HOH741 |
B | HOH812 |
A | ASN54 |
B | ARG61 |
B | ASN62 |
B | HIS64 |
B | ARG101 |
B | GLY120 |
B | VAL135 |
B | ASN136 |
B | ASN137 |
B | PHE150 |
B | HIS209 |
B | LEU290 |
B | PHE325 |
B | VAL341 |
site_id | AD2 |
Number of Residues | 20 |
Details | binding site for residue NDP B 602 |
Chain | Residue |
B | HIS185 |
B | SER192 |
B | ARG194 |
B | ASN204 |
B | HIS226 |
B | LYS228 |
B | ILE233 |
B | VAL293 |
B | TRP294 |
B | HIS296 |
B | GLN439 |
B | LEU443 |
B | VAL447 |
B | LEU448 |
B | GLN451 |
B | HOH710 |
B | HOH795 |
B | HOH843 |
B | HOH850 |
B | HOH890 |
site_id | AD3 |
Number of Residues | 3 |
Details | binding site for residue GOL B 603 |
Chain | Residue |
B | THR114 |
B | ARG116 |
B | ASN238 |
site_id | AD4 |
Number of Residues | 5 |
Details | binding site for residue K B 604 |
Chain | Residue |
B | PRO140 |
B | GLY208 |
B | LYS292 |
B | HOH804 |
B | HOH859 |
site_id | AD5 |
Number of Residues | 4 |
Details | binding site for residue CL B 605 |
Chain | Residue |
A | HOH768 |
B | ARG55 |
C | ARG55 |
D | HOH774 |
site_id | AD6 |
Number of Residues | 20 |
Details | binding site for residue HEM C 601 |
Chain | Residue |
C | ARG61 |
C | ASN62 |
C | HIS64 |
C | ARG101 |
C | GLY120 |
C | ASN136 |
C | ASN137 |
C | PHE150 |
C | LEU290 |
C | PHE325 |
C | VAL341 |
C | ARG345 |
C | SER348 |
C | TYR349 |
C | HIS353 |
C | ARG356 |
C | HOH715 |
C | HOH725 |
C | HOH811 |
D | ASN54 |
site_id | AD7 |
Number of Residues | 24 |
Details | binding site for residue NDP C 602 |
Chain | Residue |
C | PRO140 |
C | HIS185 |
C | SER192 |
C | ARG194 |
C | ASN204 |
C | HIS226 |
C | LYS228 |
C | ILE233 |
C | TRP294 |
C | PRO295 |
C | HIS296 |
C | GLN439 |
C | LEU443 |
C | VAL447 |
C | LEU448 |
C | GLN451 |
C | HOH707 |
C | HOH717 |
C | HOH732 |
C | HOH779 |
C | HOH802 |
C | HOH808 |
C | HOH817 |
C | HOH917 |
site_id | AD8 |
Number of Residues | 4 |
Details | binding site for residue GOL C 603 |
Chain | Residue |
C | THR114 |
C | ARG116 |
C | ASN238 |
C | THR242 |
site_id | AD9 |
Number of Residues | 7 |
Details | binding site for residue GOL C 604 |
Chain | Residue |
C | GLY110 |
C | ALA112 |
C | ALA245 |
C | PRO249 |
D | ALA112 |
D | ALA245 |
D | PRO249 |
site_id | AE1 |
Number of Residues | 7 |
Details | binding site for residue K C 605 |
Chain | Residue |
C | PRO140 |
C | GLY208 |
C | GLN224 |
C | LEU290 |
C | LYS292 |
C | HOH785 |
C | HOH875 |
site_id | AE2 |
Number of Residues | 3 |
Details | binding site for residue CL D 601 |
Chain | Residue |
A | ARG55 |
B | HOH776 |
D | ARG55 |
site_id | AE3 |
Number of Residues | 25 |
Details | binding site for residue HEM D 602 |
Chain | Residue |
C | ASN54 |
D | ARG61 |
D | ASN62 |
D | HIS64 |
D | ARG101 |
D | GLY120 |
D | VAL135 |
D | ASN136 |
D | ASN137 |
D | PHE150 |
D | HIS209 |
D | LEU290 |
D | PHE325 |
D | VAL341 |
D | ARG345 |
D | SER348 |
D | TYR349 |
D | ALA352 |
D | HIS353 |
D | ARG356 |
D | HOH715 |
D | HOH747 |
D | HOH748 |
D | HOH786 |
D | HOH791 |
site_id | AE4 |
Number of Residues | 23 |
Details | binding site for residue NDP D 603 |
Chain | Residue |
D | PRO140 |
D | HIS185 |
D | SER192 |
D | ARG194 |
D | ASN204 |
D | HIS226 |
D | LYS228 |
D | VAL293 |
D | TRP294 |
D | PRO295 |
D | HIS296 |
D | GLN439 |
D | LEU443 |
D | VAL447 |
D | LEU448 |
D | GLN451 |
D | HOH714 |
D | HOH718 |
D | HOH722 |
D | HOH756 |
D | HOH762 |
D | HOH783 |
D | HOH900 |
site_id | AE5 |
Number of Residues | 5 |
Details | binding site for residue GOL D 604 |
Chain | Residue |
D | ALA482 |
D | ARG483 |
D | VAL484 |
D | ASP485 |
D | ARG486 |
site_id | AE6 |
Number of Residues | 6 |
Details | binding site for residue GOL D 605 |
Chain | Residue |
D | THR114 |
D | ALA115 |
D | ARG116 |
D | ASN238 |
D | ALA241 |
D | THR242 |
site_id | AE7 |
Number of Residues | 6 |
Details | binding site for residue K D 606 |
Chain | Residue |
D | PRO140 |
D | GLY208 |
D | LEU290 |
D | LYS292 |
D | HOH876 |
D | HOH889 |
Functional Information from PROSITE/UniProt