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6RGI

Partially unfolded cytochrome c in complex with sulfonatocalix[6]arene

Functional Information from GO Data
ChainGOidnamespacecontents
A0005515molecular_functionprotein binding
A0005739cellular_componentmitochondrion
A0005758cellular_componentmitochondrial intermembrane space
A0006122biological_processmitochondrial electron transport, ubiquinol to cytochrome c
A0006123biological_processmitochondrial electron transport, cytochrome c to oxygen
A0009055molecular_functionelectron transfer activity
A0020037molecular_functionheme binding
A0046872molecular_functionmetal ion binding
A0070469cellular_componentrespirasome
A1901612molecular_functioncardiolipin binding
Functional Information from PDB Data
site_idAC1
Number of Residues17
Detailsbinding site for residue HEC A 201
ChainResidue
AARG13
ATYR67
ALEU68
ALYS72
ATYR74
AALA81
APHE82
ALEU94
AIMD203
ACYS14
ACYS17
AHIS18
AVAL28
ALEU32
AILE35
AARG38
AMET64

site_idAC2
Number of Residues13
Detailsbinding site for residue FWQ A 202
ChainResidue
ASER2
AALA3
ALYS4
AALA7
AARG13
ALYS73
AGLY77
AALA81
APHE82
AGLY83
ALYS86
ATYR97
ALYS100

site_idAC3
Number of Residues4
Detailsbinding site for residue IMD A 203
ChainResidue
ATYR67
ATYR74
APHE82
AHEC201

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsBINDING: covalent => ECO:0000269|PubMed:11880631, ECO:0000269|PubMed:18390544, ECO:0007744|PDB:1KYO, ECO:0007744|PDB:3CX5
ChainResidueDetails
ACYS14
ACYS17

site_idSWS_FT_FI2
Number of Residues2
DetailsBINDING: axial binding residue => ECO:0000269|PubMed:11880631, ECO:0000269|PubMed:18390544, ECO:0007744|PDB:1KYO, ECO:0007744|PDB:3CX5
ChainResidueDetails
AHIS18
AMET80

site_idSWS_FT_FI3
Number of Residues1
DetailsMOD_RES: N6,N6,N6-trimethyllysine; by CTM1 => ECO:0000269|PubMed:10791961, ECO:0000269|PubMed:11880631, ECO:0007744|PDB:1KYO
ChainResidueDetails
ALYS72

site_idSWS_FT_FI4
Number of Residues1
DetailsMOD_RES: N6,N6,N6-trimethyllysine => ECO:0000269|PubMed:10821864, ECO:0000269|PubMed:18390544
ChainResidueDetails
ALYS73

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PDB entries from 2024-07-10

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