6RD5

CryoEM structure of Polytomella F-ATP synthase, focussed refinement of Fo and peripheral stalk, C2 symmetry

Functional Information from GO Data

Chain	GOid	namespace	contents
0	0016020	cellular_component	membrane
1	0005739	cellular_component	mitochondrion
8	0016020	cellular_component	membrane
9	0016020	cellular_component	membrane
M	0006754	biological_process	ATP biosynthetic process
M	0009579	cellular_component	thylakoid
M	0015078	molecular_function	proton transmembrane transporter activity
M	0015986	biological_process	proton motive force-driven ATP synthesis
M	0016020	cellular_component	membrane
M	0045263	cellular_component	proton-transporting ATP synthase complex, coupling factor F(o)
M	1902600	biological_process	proton transmembrane transport

Functional Information from PDB Data

site_id	AC1
Number of Residues	13
Details	binding site for residue PEV 0 101

Chain	Residue
0	GLN13
6	GLN74
8	PHE32
8	PEV104
M	ARG98
0	PRO15
0	ALA16
0	LEU18
0	SER19
0	PEV102
0	PEV103
5	SER20
5	TRP24

---

site_id	AC2
Number of Residues	9
Details	binding site for residue PEV 0 102

Chain	Residue
0	ALA20
0	CYS31
0	THR32
0	ARG34
0	PEV101
5	SER7
5	GLN9
5	VAL17
8	THR52

---

site_id	AC3
Number of Residues	12
Details	binding site for residue PEV 0 103

Chain	Residue
0	GLY11
0	PHE12
0	PEV101
1	PEV701
6	GLY70
6	SER72
6	ALA75
6	ILE77
6	ALA78
6	GLY81
6	SER117
9	PEV102

---

site_id	AC4
Number of Residues	7
Details	binding site for residue PEV 1 701

Chain	Residue
0	PEV103
1	SER322
1	SER323
1	PHE324
1	LEU325
1	LYS327
9	PEV102

---

site_id	AC5
Number of Residues	9
Details	binding site for residue LMT 6 201

Chain	Residue
6	GLY131
6	MET132
6	PRO134
6	ALA137
6	LMT202
M	GLY112
M	ARG115
M	PHE116
M	LMT404

---

site_id	AC6
Number of Residues	5
Details	binding site for residue LMT 6 202

Chain	Residue
6	ALA128
6	MET132
6	LMT201
6	PEV205
M	LMT404

---

site_id	AC7
Number of Residues	5
Details	binding site for residue PEV 6 203

Chain	Residue
6	TRP112
6	LEU119
9	HIS41
M	CYS279
M	ALA283

---

site_id	AC8
Number of Residues	6
Details	binding site for residue PEV 6 204

Chain	Residue
0	ASN29
6	GLY81
6	TRP85
6	TYR88
M	ASN171
M	GLU172

---

site_id	AC9
Number of Residues	6
Details	binding site for residue PEV 6 205

Chain	Residue
1	SER323
6	ALA124
6	ALA128
6	PHE129
6	LMT202
M	LEU105

---

site_id	AD1
Number of Residues	6
Details	binding site for residue LMT 8 101

Chain	Residue
8	PRO42
8	TRP45
8	GLY49
8	THR56
8	PEV104
M	PHE202

---

site_id	AD2
Number of Residues	3
Details	binding site for residue PEV 8 102

Chain	Residue
8	TYR58
8	LEU64
8	LYS71

---

site_id	AD3
Number of Residues	2
Details	binding site for residue LMT 8 103

Chain	Residue
8	GLY59
8	LEU64

---

site_id	AD4
Number of Residues	6
Details	binding site for residue PEV 8 104

Chain	Residue
0	PEV101
8	SER31
8	PHE32
8	TYR33
8	THR37
8	LMT101

---

site_id	AD5
Number of Residues	6
Details	binding site for residue LMT 9 101

Chain	Residue
0	ALA64
0	PHE65
0	LYS67
9	ALA55
9	ASN56
M	PHE170

---

site_id	AD6
Number of Residues	11
Details	binding site for residue PEV 9 102

Chain	Residue
6	SER117
9	THR4
9	LEU7
9	GLY8
9	PHE11
9	PHE18
9	LMT103
0	PEV103
1	PHE324
1	PEV701
6	GLY70

---

site_id	AD7
Number of Residues	8
Details	binding site for residue LMT 9 103

Chain	Residue
6	ILE114
6	SER117
6	SER118
9	TYR14
9	PHE15
9	VAL37
9	ARG40
9	PEV102

---

site_id	AD8
Number of Residues	3
Details	binding site for residue ZN M 401

Chain	Residue
6	HOH310
M	HIS248
M	HIS252

---

site_id	AD9
Number of Residues	9
Details	binding site for residue PEV M 402

Chain	Residue
0	PHE12
0	GLN13
5	TRP21
5	GLN29
5	LEU30
M	ARG98
M	VAL100
M	PRO106
M	THR107

---

site_id	AE1
Number of Residues	5
Details	binding site for residue LMT M 403

Chain	Residue
M	PHE116
M	GLN120
M	ASN121
M	ILE301
M	LMT404

---

site_id	AE2
Number of Residues	6
Details	binding site for residue LMT M 404

Chain	Residue
6	LMT201
6	LMT202
M	ARG115
M	PHE116
M	SER119
M	LMT403

---

Functional Information from PROSITE/UniProt

site_id	PS00449
Number of Residues	10
Details	ATPASE_A ATP synthase a subunit signature. SLGVRLWVNM

Chain	Residue	Details
M	SER235-MET244

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