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6R8W

Human Cyclophilin D in complex with 2-(exo-3,5-Dioxo-4-aza-tricyclo[5.2.1.02,6]dec-4-yl)-N-((1R,9R,10S)-10-hydroxy-12-oxa-8-aza-tricyclo[7.3.1.02,7]trideca-2(7),3,5-trien-4-ylmethyl)-acetamide

Functional Information from GO Data
ChainGOidnamespacecontents
A0000413biological_processprotein peptidyl-prolyl isomerization
A0003755molecular_functionpeptidyl-prolyl cis-trans isomerase activity
A0006457biological_processprotein folding
Functional Information from PDB Data
site_idAC1
Number of Residues8
Detailsbinding site for residue O4B A 301
ChainResidue
ASER101
ASER101
APHE102
APHE102
ALYS190
ALYS190
AHOH422
AHOH422

site_idAC2
Number of Residues9
Detailsbinding site for residue P6G A 302
ChainResidue
AILE120
ATYR121
AVAL135
APRO137
AHIS173
AHOH435
AHOH477
AHOH521
APHE88

site_idAC3
Number of Residues20
Detailsbinding site for residue JVH A 303
ChainResidue
AARG97
AARG97
APHE102
AGLN105
AGLY114
ATHR115
ATHR115
AGLY116
ASER123
AARG124
AALA143
AASN144
ATHR149
AGLY151
AGLN153
APHE155
AHIS168
AHOH454
AHOH464
AHOH481

Functional Information from PROSITE/UniProt
site_idPS00170
Number of Residues18
DetailsCSA_PPIASE_1 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. YkgStFHRVIpsFMcQAG
ChainResidueDetails
ATYR90-GLY107

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsMOD_RES: N6-succinyllysine; alternate => ECO:0000250|UniProtKB:Q99KR7
ChainResidueDetails
ALYS67

site_idSWS_FT_FI2
Number of Residues3
DetailsMOD_RES: N6-succinyllysine => ECO:0000250|UniProtKB:Q99KR7
ChainResidueDetails
ALYS86
AILE175
ALYS190

site_idSWS_FT_FI3
Number of Residues1
DetailsMOD_RES: N6-acetyllysine => ECO:0000250|UniProtKB:Q99KR7
ChainResidueDetails
ALYS167

site_idSWS_FT_FI4
Number of Residues1
DetailsMOD_RES: S-nitrosocysteine => ECO:0000250|UniProtKB:Q99KR7
ChainResidueDetails
ACYS203

218853

PDB entries from 2024-04-24

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