6R8O
Human Cyclophilin D in complex with 1-(((2R,3S,6R)-3-hydroxy-2,3,4,6-tetrahydro-1H-2,6-methanobenzo[c][1,5]oxazocin-8-yl)methyl)-3-(2-((R)-2-(2-(methylthio)phenyl)pyrrolidin-1-yl)-2-oxoethyl)urea
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0000413 | biological_process | protein peptidyl-prolyl isomerization |
A | 0003755 | molecular_function | peptidyl-prolyl cis-trans isomerase activity |
A | 0006457 | biological_process | protein folding |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 7 |
Details | binding site for residue PG4 A 301 |
Chain | Residue |
A | ILE120 |
A | VAL135 |
A | PRO137 |
A | HIS173 |
A | HOH547 |
A | HOH553 |
A | HOH554 |
site_id | AC2 |
Number of Residues | 6 |
Details | binding site for residue SO4 A 302 |
Chain | Residue |
A | GLY177 |
A | MET178 |
A | ASP179 |
A | HOH408 |
A | LYS73 |
A | GLU176 |
site_id | AC3 |
Number of Residues | 3 |
Details | binding site for residue PO4 A 303 |
Chain | Residue |
A | SER189 |
A | LYS190 |
A | HOH404 |
site_id | AC4 |
Number of Residues | 24 |
Details | binding site for residue JV2 A 304 |
Chain | Residue |
A | ARG97 |
A | ARG97 |
A | PHE102 |
A | MET103 |
A | GLN105 |
A | GLY114 |
A | THR115 |
A | THR115 |
A | GLY116 |
A | GLY117 |
A | SER123 |
A | ARG124 |
A | ALA143 |
A | ASN144 |
A | THR149 |
A | GLY151 |
A | GLN153 |
A | PHE155 |
A | HIS168 |
A | LYS190 |
A | SER191 |
A | HOH458 |
A | HOH481 |
A | HOH486 |
Functional Information from PROSITE/UniProt
site_id | PS00170 |
Number of Residues | 18 |
Details | CSA_PPIASE_1 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. YkgStFHRVIpsFMcQAG |
Chain | Residue | Details |
A | TYR90-GLY107 | |
Functional Information from SwissProt/UniProt
Chain | Residue | Details |
A | LYS67 | |
Chain | Residue | Details |
A | LYS86 | |
A | ILE175 | |
A | LYS190 | |
Chain | Residue | Details |
A | LYS167 | |
Chain | Residue | Details |
A | CYS203 | |