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6R1R

RIBONUCLEOTIDE REDUCTASE E441D MUTANT R1 PROTEIN FROM ESCHERICHIA COLI

Functional Information from GO Data
ChainGOidnamespacecontents
A0004748molecular_functionribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor
A0005524molecular_functionATP binding
A0009263biological_processdeoxyribonucleotide biosynthetic process
B0004748molecular_functionribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor
B0005524molecular_functionATP binding
B0009263biological_processdeoxyribonucleotide biosynthetic process
C0004748molecular_functionribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor
C0005524molecular_functionATP binding
C0009263biological_processdeoxyribonucleotide biosynthetic process
Functional Information from PDB Data
site_idACA
Number of Residues5
DetailsACTIVE SITE WITH GLUTAMATE 441 MUTATED TO ASPARTATE.
ChainResidue
ACYS225
ACYS462
ACYS439
AASN437
AASP441

site_idACB
Number of Residues5
DetailsACTIVE SITE WITH GLUTAMATE 441 MUTATED TO ASPARTATE.
ChainResidue
BASP441
BCYS225
BCYS462
BCYS439
BASN437

site_idACC
Number of Residues5
DetailsACTIVE SITE WITH GLUTAMATE 441 MUTATED TO ASPARTATE.
ChainResidue
CCYS225
CCYS462
CCYS439
CASN437
CASP441

Functional Information from PROSITE/UniProt
site_idPS00089
Number of Residues23
DetailsRIBORED_LARGE Ribonucleotide reductase large subunit signature. WeaLresikthGLRNstlSAlmP
ChainResidueDetails
ATRP599-PRO621

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues6
DetailsACT_SITE: Proton acceptor
ChainResidueDetails
AASN437
AASP441
BASN437
BASP441
CASN437
CASP441

site_idSWS_FT_FI2
Number of Residues3
DetailsACT_SITE: Cysteine radical intermediate
ChainResidueDetails
ACYS439
BCYS439
CCYS439

site_idSWS_FT_FI3
Number of Residues12
DetailsBINDING: BINDING => ECO:0000269|PubMed:9309223, ECO:0007744|PDB:3R1R
ChainResidueDetails
ALYS9
CGLU15
CTHR55
CLYS91
AGLU15
ATHR55
ALYS91
BLYS9
BGLU15
BTHR55
BLYS91
CLYS9

site_idSWS_FT_FI4
Number of Residues21
DetailsBINDING: BINDING => ECO:0000269|PubMed:9309223, ECO:0007744|PDB:4R1R
ChainResidueDetails
ATHR209
BARG262
BARG269
BASN437
BASP441
BGLU623
CTHR209
CASP232
CARG262
CARG269
CASN437
AASP232
CASP441
CGLU623
AARG262
AARG269
AASN437
AASP441
AGLU623
BTHR209
BASP232

site_idSWS_FT_FI5
Number of Residues6
DetailsSITE: Important for hydrogen atom transfer
ChainResidueDetails
ACYS225
ACYS462
BCYS225
BCYS462
CCYS225
CCYS462

site_idSWS_FT_FI6
Number of Residues6
DetailsSITE: Important for electron transfer
ChainResidueDetails
ATYR730
ATYR731
BTYR730
BTYR731
CTYR730
CTYR731

site_idSWS_FT_FI7
Number of Residues6
DetailsSITE: Interacts with thioredoxin/glutaredoxin
ChainResidueDetails
ACYS754
ACYS759
BCYS754
BCYS759
CCYS754
CCYS759

site_idSWS_FT_FI8
Number of Residues3
DetailsMOD_RES: N6-acetyllysine => ECO:0000269|PubMed:18723842
ChainResidueDetails
ALYS283
BLYS283
CLYS283

Catalytic Information from CSA
site_idCSA1
Number of Residues5
DetailsAnnotated By Reference To The Literature 3r1r
ChainResidueDetails
AASP441
ACYS462
ACYS439
ACYS225
AASN437

site_idCSA2
Number of Residues5
DetailsAnnotated By Reference To The Literature 3r1r
ChainResidueDetails
BASP441
BCYS462
BCYS439
BCYS225
BASN437

site_idCSA3
Number of Residues5
DetailsAnnotated By Reference To The Literature 3r1r
ChainResidueDetails
CASP441
CCYS462
CCYS439
CCYS225
CASN437

site_idMCSA1
Number of Residues
DetailsM-CSA 918
ChainResidueDetails
ACYS225proton donor
AASN437
ACYS439hydrogen radical acceptor, hydrogen radical donor, single electron acceptor
AASP441proton acceptor
ACYS462
ATYR730pi-pi interaction, single electron relay
ATYR731pi-pi interaction, single electron relay

site_idMCSA2
Number of Residues
DetailsM-CSA 918
ChainResidueDetails
BCYS225proton donor
BASN437
BCYS439hydrogen radical acceptor, hydrogen radical donor, single electron acceptor
BASP441proton acceptor
BCYS462
BTYR730pi-pi interaction, single electron relay
BTYR731pi-pi interaction, single electron relay

site_idMCSA3
Number of Residues
DetailsM-CSA 918
ChainResidueDetails
CCYS225proton donor
CASN437
CCYS439hydrogen radical acceptor, hydrogen radical donor, single electron acceptor
CASP441proton acceptor
CCYS462
CTYR730pi-pi interaction, single electron relay
CTYR731pi-pi interaction, single electron relay

site_idMCSA4
Number of Residues
DetailsM-CSA 918
ChainResidueDetails

227111

PDB entries from 2024-11-06

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