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6QZD

HLA-DR1 with SGP Influenza Matrix Peptide

This is a non-PDB format compatible entry.
Functional Information from GO Data
ChainGOidnamespacecontents
AAA0006955biological_processimmune response
AAA0016020cellular_componentmembrane
AAA0019882biological_processantigen processing and presentation
AAA0042613cellular_componentMHC class II protein complex
BBB0006955biological_processimmune response
BBB0016020cellular_componentmembrane
BBB0019882biological_processantigen processing and presentation
BBB0042613cellular_componentMHC class II protein complex
DDD0006955biological_processimmune response
DDD0016020cellular_componentmembrane
DDD0019882biological_processantigen processing and presentation
DDD0042613cellular_componentMHC class II protein complex
EEE0006955biological_processimmune response
EEE0016020cellular_componentmembrane
EEE0019882biological_processantigen processing and presentation
EEE0042613cellular_componentMHC class II protein complex
Functional Information from PROSITE/UniProt
site_idPS00290
Number of Residues7
DetailsIG_MHC Immunoglobulins and major histocompatibility complex proteins signature. YDCRVEH
ChainResidueDetails
AAATYR161-HIS167
BBBTYR171-HIS177

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues8
DetailsBINDING: BINDING => ECO:0000269|PubMed:31619516, ECO:0000269|PubMed:8145819
ChainResidueDetails
EEETRP61
EEEASP57
EEEHIS81
EEEASN82
BBBASP57
BBBTRP61
BBBHIS81
BBBASN82

site_idSWS_FT_FI2
Number of Residues2
DetailsBINDING: BINDING => ECO:0000269|PubMed:8145819
ChainResidueDetails
DDDGLY49
DDDALA52
BBBARG93
EEEARG93

site_idSWS_FT_FI3
Number of Residues2
DetailsCARBOHYD: N-linked (GlcNAc...) asparagine => ECO:0000269|PubMed:19303388, ECO:0000269|PubMed:24190431
ChainResidueDetails
BBBASN19
EEEASN19

site_idSWS_FT_FI4
Number of Residues2
DetailsSITE: Self- and pathogen-derived peptide antigen => ECO:0000269|PubMed:17583734, ECO:0000269|PubMed:21115828, ECO:0000269|PubMed:31619516, ECO:0000269|PubMed:8145819
ChainResidueDetails
AAASER53
DDDSER53

site_idSWS_FT_FI5
Number of Residues2
DetailsSITE: Pathogen-derived peptide antigen => ECO:0000269|PubMed:23260142, ECO:0007744|PDB:4GBX
ChainResidueDetails
AAAGLU55
DDDGLU55

site_idSWS_FT_FI6
Number of Residues2
DetailsSITE: Self- and pathogen-derived peptide antigen => ECO:0000269|PubMed:17583734, ECO:0000269|PubMed:21115828, ECO:0000269|PubMed:23260142, ECO:0000269|PubMed:31619516, ECO:0000269|PubMed:8145819, ECO:0007744|PDB:4GBX
ChainResidueDetails
AAAASN62
DDDASN62

site_idSWS_FT_FI7
Number of Residues2
DetailsSITE: Pathogen-derived peptide antigen => ECO:0000269|PubMed:17583734, ECO:0000269|PubMed:21115828, ECO:0000269|PubMed:23260142, ECO:0000269|PubMed:8145819, ECO:0007744|PDB:4FQX, ECO:0007744|PDB:4GBX
ChainResidueDetails
AAAASN69
DDDASN69

site_idSWS_FT_FI8
Number of Residues2
DetailsSITE: Self- and pathogen-derived peptide antigen => ECO:0000269|PubMed:17583734, ECO:0000269|PubMed:23260142, ECO:0000269|PubMed:31619516, ECO:0000269|PubMed:8145819, ECO:0007744|PDB:4FQX, ECO:0007744|PDB:4GBX
ChainResidueDetails
AAAARG76
DDDARG76

site_idSWS_FT_FI9
Number of Residues4
DetailsCARBOHYD: N-linked (GlcNAc...) asparagine => ECO:0000269|PubMed:19159218, ECO:0000269|PubMed:7477400
ChainResidueDetails
AAAASN78
AAAASN118
DDDASN78
DDDASN118

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PDB entries from 2024-06-12

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