Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6QRE

Crystal structure of TrmD, a tRNA-(N1G37) methyltransferase, from Mycobacterium abscessus in complex with inhibitor

Functional Information from GO Data
ChainGOidnamespacecontents
A0002939biological_processtRNA N1-guanine methylation
A0005737cellular_componentcytoplasm
A0005829cellular_componentcytosol
A0006400biological_processtRNA modification
A0008033biological_processtRNA processing
A0008168molecular_functionmethyltransferase activity
A0032259biological_processmethylation
A0052906molecular_functiontRNA (guanine(37)-N1)-methyltransferase activity
B0002939biological_processtRNA N1-guanine methylation
B0005737cellular_componentcytoplasm
B0005829cellular_componentcytosol
B0006400biological_processtRNA modification
B0008033biological_processtRNA processing
B0008168molecular_functionmethyltransferase activity
B0032259biological_processmethylation
B0052906molecular_functiontRNA (guanine(37)-N1)-methyltransferase activity
Functional Information from PDB Data
site_idAC1
Number of Residues13
Detailsbinding site for residue JCQ A 301
ChainResidue
APRO83
ALEU138
AGLY140
AGLY141
BJCQ302
ATHR84
APRO85
ATYR111
AGLY113
ASER132
AILE133
AGLY134
ATYR136

site_idAC2
Number of Residues11
Detailsbinding site for residue JCQ B 301
ChainResidue
BPRO83
BTHR84
BPRO85
BGLY109
BSER132
BILE133
BGLY134
BTYR136
BLEU138
BGLY140
BGLY141

site_idAC3
Number of Residues9
Detailsbinding site for residue JCQ B 302
ChainResidue
APRO85
AALA86
ATYR111
AASP135
AJCQ301
BMET175
BSER177
BLEU178
BGLU180

site_idAC4
Number of Residues6
Detailsbinding site for residue JCQ B 303
ChainResidue
ASER177
ALEU179
AGLU180
BPRO85
BALA86
BASP135

Functional Information from PROSITE/UniProt
site_idPS00430
Number of Residues86
DetailsTONB_DEPENDENT_REC_1 TonB-dependent receptor (TBDR) proteins signature 1. gsmkidvvtifpeylqpvrqslpgkaidaglvdvavhdlrrwthdvhksvddspygggpgmvmkptvwgdaldeicts.....................................ETLLVVPT
ChainResidueDetails
AGLY-1-THR84

221371

PDB entries from 2024-06-19

PDB statisticsPDBj update infoContact PDBjnumon