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SummaryStructural detailsExperimental detailsFunctional detailsSequence NeighborHistoryDownloads

6QGY

Crystal structure of E.coli BamA beta-barrel in complex with nanobody B12

Functional Information from GO Data
ChainGOidnamespacecontents
A0019867cellular_componentouter membrane
A0071709biological_processmembrane assembly
C0019867cellular_componentouter membrane
C0071709biological_processmembrane assembly
Functional Information from PDB Data
site_idAC1
Number of Residues2
Detailsbinding site for residue C8E A 901
ChainResidue
AGLU470
ATYR509
site_idAC2
Number of Residues1
Detailsbinding site for residue C8E A 902
ChainResidue
AILE458
site_idAC3
Number of Residues1
Detailsbinding site for residue C8E A 903
ChainResidue
ATYR578
site_idAC4
Number of Residues3
Detailsbinding site for residue C8E A 904
ChainResidue
AVAL483
ALEU515
CVAL599
site_idAC5
Number of Residues6
Detailsbinding site for residue C8E A 905
ChainResidue
ATHR588
DGLN4
DTRP33
DTYR113
AASP582
AARG583
site_idAC6
Number of Residues4
Detailsbinding site for residue C8E C 901
ChainResidue
CTRP627
CPRO721
CPRO723
CPHE737
site_idAC7
Number of Residues1
Detailsbinding site for residue C8E C 902
ChainResidue
CLEU489
site_idAC8
Number of Residues4
Detailsbinding site for residue C8E C 903
ChainResidue
AVAL513
CPHE570
CGLY603
CC8E904
site_idAC9
Number of Residues2
Detailsbinding site for residue C8E C 904
ChainResidue
CTYR531
CC8E903
site_idAD1
Number of Residues1
Detailsbinding site for residue C8E C 905
ChainResidue
CSER484
Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsTopological domain: {"description":"Extracellular; loop 1","evidences":[{"evidenceCode":"ECO:0000305"}]}
ChainResidueDetails
site_idSWS_FT_FI2
Number of Residues20
DetailsTransmembrane: {"description":"Beta stranded; Name=Strand 2","evidences":[{"source":"PubMed","id":"24914988","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails
site_idSWS_FT_FI3
Number of Residues126
DetailsTopological domain: {"description":"Periplasmic","evidences":[{"evidenceCode":"ECO:0000305"}]}
ChainResidueDetails
site_idSWS_FT_FI4
Number of Residues14
DetailsTransmembrane: {"description":"Beta stranded; Name=Strand 3","evidences":[{"source":"PubMed","id":"24914988","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails
site_idSWS_FT_FI5
Number of Residues4
DetailsTopological domain: {"description":"Extracellular; loop 2","evidences":[{"evidenceCode":"ECO:0000305"}]}
ChainResidueDetails
site_idSWS_FT_FI6
Number of Residues18
DetailsTransmembrane: {"description":"Beta stranded; Name=Strand 4","evidences":[{"source":"PubMed","id":"24914988","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails
site_idSWS_FT_FI7
Number of Residues22
DetailsTransmembrane: {"description":"Beta stranded; Name=Strand 5","evidences":[{"source":"PubMed","id":"24914988","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails
site_idSWS_FT_FI8
Number of Residues16
DetailsTopological domain: {"description":"Extracellular; loop 3","evidences":[{"evidenceCode":"ECO:0000305"}]}
ChainResidueDetails
site_idSWS_FT_FI9
Number of Residues2
DetailsTransmembrane: {"description":"Beta stranded; Name=Strand 6","evidences":[{"source":"PubMed","id":"24914988","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails
site_idSWS_FT_FI10
Number of Residues24
DetailsTransmembrane: {"description":"Beta stranded; Name=Strand 7","evidences":[{"source":"PubMed","id":"24914988","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails
site_idSWS_FT_FI11
Number of Residues54
DetailsTopological domain: {"description":"Extracellular; loop 4","evidences":[{"source":"PubMed","id":"23882017","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"24914988","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails
site_idSWS_FT_FI12
Number of Residues26
DetailsTransmembrane: {"description":"Beta stranded; Name=Strand 8","evidences":[{"source":"PubMed","id":"24914988","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails
site_idSWS_FT_FI13
Number of Residues18
DetailsTransmembrane: {"description":"Beta stranded; Name=Strand 9","evidences":[{"source":"PubMed","id":"24914988","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails
site_idSWS_FT_FI14
Number of Residues14
DetailsTopological domain: {"description":"Extracellular; loop 5","evidences":[{"evidenceCode":"ECO:0000305"}]}
ChainResidueDetails
site_idSWS_FT_FI15
Number of Residues20
DetailsTransmembrane: {"description":"Beta stranded; Name=Strand 10","evidences":[{"source":"PubMed","id":"24914988","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails
site_idSWS_FT_FI16
Number of Residues20
DetailsTransmembrane: {"description":"Beta stranded; Name=Strand 11","evidences":[{"source":"PubMed","id":"24914988","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails
site_idSWS_FT_FI17
Number of Residues18
DetailsTransmembrane: {"description":"Beta stranded; Name=Strand 12","evidences":[{"source":"PubMed","id":"24914988","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails
site_idSWS_FT_FI18
Number of Residues24
DetailsTransmembrane: {"description":"Beta stranded; Name=Strand 13","evidences":[{"source":"PubMed","id":"24914988","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails
site_idSWS_FT_FI19
Number of Residues42
DetailsTopological domain: {"description":"Extracellular; loop 7","evidences":[{"evidenceCode":"ECO:0000305"}]}
ChainResidueDetails
site_idSWS_FT_FI20
Number of Residues18
DetailsTransmembrane: {"description":"Beta stranded; Name=Strand 14","evidences":[{"source":"PubMed","id":"24914988","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails
site_idSWS_FT_FI21
Number of Residues20
DetailsTransmembrane: {"description":"Beta stranded; Name=Strand 15","evidences":[{"source":"PubMed","id":"24914988","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails
site_idSWS_FT_FI22
Number of Residues26
DetailsTopological domain: {"description":"Extracellular; loop 8","evidences":[{"evidenceCode":"ECO:0000305"}]}
ChainResidueDetails
site_idSWS_FT_FI23
Number of Residues8
DetailsTransmembrane: {"description":"Beta stranded; Name=Strand 16","evidences":[{"source":"PubMed","id":"24914988","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

247035

PDB entries from 2026-01-07

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