Summary Structural details Experimental details Functional details Sequence Neighbor History Downloads

6QGX

Crystal structure of E.coli BamA beta-barrel in complex with nanobody F7

Functional Information from GO Data

Chain	GOid	namespace	contents
A	0019867	cellular_component	outer membrane
A	0071709	biological_process	membrane assembly

Functional Information from PDB Data

site_id	AC1
Number of Residues	2
Details	binding site for residue C8E A 1001

Chain	Residue
A	TRP739
A	MET741

site_id	AC2
Number of Residues	1
Details	binding site for residue C8E A 1002

Chain	Residue
A	ILE621

site_id	AC3
Number of Residues	1
Details	binding site for residue C8E A 1003

Chain	Residue
A	ARG488

site_id	AC4
Number of Residues	5
Details	binding site for residue C8E A 1004

Chain	Residue
A	LEU489
A	TYR491
A	TYR578
A	C8E1007
A	C8E1008

site_id	AC5
Number of Residues	3
Details	binding site for residue C8E A 1005

Chain	Residue
A	PRO721
A	PHE737
A	HOH1123

site_id	AC6
Number of Residues	1
Details	binding site for residue C8E A 1006

Chain	Residue
A	TYR491

site_id	AC7
Number of Residues	1
Details	binding site for residue C8E A 1007

Chain	Residue
A	C8E1004

site_id	AC8
Number of Residues	4
Details	binding site for residue C8E A 1008

Chain	Residue
A	TYR509
A	LYS580
A	ASP589
A	C8E1004

site_id	AC9
Number of Residues	3
Details	binding site for residue C8E A 1009

Chain	Residue
A	ASP481
A	PHE517
A	TRP776

site_id	AD1
Number of Residues	3
Details	binding site for residue C8E A 1010

Chain	Residue
A	ASN523
A	TRP576
A	PHE724

site_id	AD2
Number of Residues	4
Details	binding site for residue C8E A 1011

Chain	Residue
A	THR600
A	TYR787
A	GLN801
A	PHE802

Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI1
Number of Residues	1
Details	Topological domain: {"description":"Extracellular; loop 1","evidences":[{"evidenceCode":"ECO:0000305"}]}

Chain

Residue

Details

site_id	SWS_FT_FI2
Number of Residues	10
Details	Transmembrane: {"description":"Beta stranded; Name=Strand 2","evidences":[{"source":"PubMed","id":"24914988","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

site_id	SWS_FT_FI3
Number of Residues	63
Details	Topological domain: {"description":"Periplasmic","evidences":[{"evidenceCode":"ECO:0000305"}]}

Chain

Residue

Details

site_id	SWS_FT_FI4
Number of Residues	7
Details	Transmembrane: {"description":"Beta stranded; Name=Strand 3","evidences":[{"source":"PubMed","id":"24914988","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

site_id	SWS_FT_FI5
Number of Residues	2
Details	Topological domain: {"description":"Extracellular; loop 2","evidences":[{"evidenceCode":"ECO:0000305"}]}

Chain

Residue

Details

site_id	SWS_FT_FI6
Number of Residues	9
Details	Transmembrane: {"description":"Beta stranded; Name=Strand 4","evidences":[{"source":"PubMed","id":"24914988","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

site_id	SWS_FT_FI7
Number of Residues	11
Details	Transmembrane: {"description":"Beta stranded; Name=Strand 5","evidences":[{"source":"PubMed","id":"24914988","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

site_id	SWS_FT_FI8
Number of Residues	8
Details	Topological domain: {"description":"Extracellular; loop 3","evidences":[{"evidenceCode":"ECO:0000305"}]}

Chain

Residue

Details

site_id	SWS_FT_FI9
Number of Residues	1
Details	Transmembrane: {"description":"Beta stranded; Name=Strand 6","evidences":[{"source":"PubMed","id":"24914988","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

site_id	SWS_FT_FI10
Number of Residues	12
Details	Transmembrane: {"description":"Beta stranded; Name=Strand 7","evidences":[{"source":"PubMed","id":"24914988","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

site_id	SWS_FT_FI11
Number of Residues	27
Details	Topological domain: {"description":"Extracellular; loop 4","evidences":[{"source":"PubMed","id":"23882017","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"24914988","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

site_id	SWS_FT_FI12
Number of Residues	13
Details	Transmembrane: {"description":"Beta stranded; Name=Strand 8","evidences":[{"source":"PubMed","id":"24914988","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

site_id	SWS_FT_FI13
Number of Residues	9
Details	Transmembrane: {"description":"Beta stranded; Name=Strand 9","evidences":[{"source":"PubMed","id":"24914988","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

site_id	SWS_FT_FI14
Number of Residues	7
Details	Topological domain: {"description":"Extracellular; loop 5","evidences":[{"evidenceCode":"ECO:0000305"}]}

Chain

Residue

Details

site_id	SWS_FT_FI15
Number of Residues	10
Details	Transmembrane: {"description":"Beta stranded; Name=Strand 10","evidences":[{"source":"PubMed","id":"24914988","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

site_id	SWS_FT_FI16
Number of Residues	10
Details	Transmembrane: {"description":"Beta stranded; Name=Strand 11","evidences":[{"source":"PubMed","id":"24914988","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

site_id	SWS_FT_FI17
Number of Residues	9
Details	Transmembrane: {"description":"Beta stranded; Name=Strand 12","evidences":[{"source":"PubMed","id":"24914988","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

site_id	SWS_FT_FI18
Number of Residues	12
Details	Transmembrane: {"description":"Beta stranded; Name=Strand 13","evidences":[{"source":"PubMed","id":"24914988","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

site_id	SWS_FT_FI19
Number of Residues	21
Details	Topological domain: {"description":"Extracellular; loop 7","evidences":[{"evidenceCode":"ECO:0000305"}]}

Chain

Residue

Details

site_id	SWS_FT_FI20
Number of Residues	9
Details	Transmembrane: {"description":"Beta stranded; Name=Strand 14","evidences":[{"source":"PubMed","id":"24914988","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

site_id	SWS_FT_FI21
Number of Residues	10
Details	Transmembrane: {"description":"Beta stranded; Name=Strand 15","evidences":[{"source":"PubMed","id":"24914988","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

site_id	SWS_FT_FI22
Number of Residues	13
Details	Topological domain: {"description":"Extracellular; loop 8","evidences":[{"evidenceCode":"ECO:0000305"}]}

Chain

Residue

Details

site_id	SWS_FT_FI23
Number of Residues	4
Details	Transmembrane: {"description":"Beta stranded; Name=Strand 16","evidences":[{"source":"PubMed","id":"24914988","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

		Sequence (fasta)
		PDBx/mmCIF
		PDBML format (no-atom)
		PDB format (full)
		Validation report (PDF)
		EDMap 2fo-fc (MTZ)