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6QGB

Crystal structure of Ideonella sakaiensis MHETase bound to benzoic acid

Functional Information from GO Data
ChainGOidnamespacecontents
A0009279cellular_componentcell outer membrane
A0016020cellular_componentmembrane
A0016787molecular_functionhydrolase activity
A0042178biological_processxenobiotic catabolic process
A0046872molecular_functionmetal ion binding
A0052689molecular_functioncarboxylic ester hydrolase activity
B0009279cellular_componentcell outer membrane
B0016020cellular_componentmembrane
B0016787molecular_functionhydrolase activity
B0042178biological_processxenobiotic catabolic process
B0046872molecular_functionmetal ion binding
B0052689molecular_functioncarboxylic ester hydrolase activity
C0009279cellular_componentcell outer membrane
C0016020cellular_componentmembrane
C0016787molecular_functionhydrolase activity
C0042178biological_processxenobiotic catabolic process
C0046872molecular_functionmetal ion binding
C0052689molecular_functioncarboxylic ester hydrolase activity
D0009279cellular_componentcell outer membrane
D0016020cellular_componentmembrane
D0016787molecular_functionhydrolase activity
D0042178biological_processxenobiotic catabolic process
D0046872molecular_functionmetal ion binding
D0052689molecular_functioncarboxylic ester hydrolase activity
E0009279cellular_componentcell outer membrane
E0016020cellular_componentmembrane
E0016787molecular_functionhydrolase activity
E0042178biological_processxenobiotic catabolic process
E0046872molecular_functionmetal ion binding
E0052689molecular_functioncarboxylic ester hydrolase activity
F0009279cellular_componentcell outer membrane
F0016020cellular_componentmembrane
F0016787molecular_functionhydrolase activity
F0042178biological_processxenobiotic catabolic process
F0046872molecular_functionmetal ion binding
F0052689molecular_functioncarboxylic ester hydrolase activity
Functional Information from PDB Data
site_idAC1
Number of Residues11
Detailsbinding site for residue BEZ A 701
ChainResidue
AGLY132
AHOH815
AHOH921
ASER225
ALEU254
AALA257
ATRP397
AARG411
APHE415
ASER416
APHE495

site_idAC2
Number of Residues6
Detailsbinding site for residue CA A 702
ChainResidue
AASP304
AASP307
ALEU309
AASP311
AILE313
AHOH809

site_idAC3
Number of Residues1
Detailsbinding site for residue CL A 703
ChainResidue
AGLY147

site_idAC4
Number of Residues1
Detailsbinding site for residue CL A 704
ChainResidue
AASP590

site_idAC5
Number of Residues3
Detailsbinding site for residue SO4 A 705
ChainResidue
ATRP121
AASN122
DASN122

site_idAC6
Number of Residues1
Detailsbinding site for residue SO4 A 706
ChainResidue
AARG519

site_idAC7
Number of Residues4
Detailsbinding site for residue MPD B 801
ChainResidue
BTRP263
BGLN266
BSER267
BARG359

site_idAC8
Number of Residues11
Detailsbinding site for residue BEZ B 802
ChainResidue
BGLY132
BSER225
BLEU254
BALA257
BTRP397
BARG411
BPHE415
BSER416
BPHE495
BHOH1010
BHOH1016

site_idAC9
Number of Residues6
Detailsbinding site for residue CA B 803
ChainResidue
BASP304
BASP307
BLEU309
BASP311
BILE313
BHOH967

site_idAD1
Number of Residues2
Detailsbinding site for residue SO4 B 805
ChainResidue
BASN122
ETRP121

site_idAD2
Number of Residues5
Detailsbinding site for residue SO4 B 806
ChainResidue
BARG480
BHOH902
BHOH907
CASN65
CGLN199

site_idAD3
Number of Residues1
Detailsbinding site for residue SO4 B 807
ChainResidue
BARG519

site_idAD4
Number of Residues9
Detailsbinding site for residue BEZ C 701
ChainResidue
CGLY132
CSER225
CLEU254
CTRP397
CPHE415
CSER416
CPHE495
CHOH835
CHOH930

site_idAD5
Number of Residues6
Detailsbinding site for residue CA C 702
ChainResidue
CASP304
CASP307
CLEU309
CASP311
CILE313
CHOH887

site_idAD6
Number of Residues1
Detailsbinding site for residue CL C 703
ChainResidue
CASP590

site_idAD7
Number of Residues2
Detailsbinding site for residue SO4 C 704
ChainResidue
CARG519
CHOH1020

site_idAD8
Number of Residues11
Detailsbinding site for residue BEZ D 701
ChainResidue
DGLY132
DSER225
DLEU254
DALA257
DTRP397
DARG411
DPHE415
DSER416
DPHE495
DHOH817
DHOH942

site_idAD9
Number of Residues6
Detailsbinding site for residue CA D 702
ChainResidue
DASP304
DASP307
DLEU309
DASP311
DILE313
DHOH923

site_idAE1
Number of Residues11
Detailsbinding site for residue BEZ E 701
ChainResidue
EGLY132
ESER225
ELEU254
EALA257
ETRP397
EARG411
EPHE415
ESER416
EPHE495
EHOH922
EHOH1007

site_idAE2
Number of Residues6
Detailsbinding site for residue CA E 702
ChainResidue
EASP307
ELEU309
EASP311
EILE313
EHOH837
EASP304

site_idAE3
Number of Residues3
Detailsbinding site for residue CL E 703
ChainResidue
EALA515
EGLY516
EARG519

site_idAE4
Number of Residues3
Detailsbinding site for residue SO4 E 704
ChainResidue
ATYR585
ALYS586
EHOH801

site_idAE5
Number of Residues12
Detailsbinding site for residue BEZ F 701
ChainResidue
FGLY132
FSER225
FLEU254
FALA257
FTRP397
FARG411
FPHE415
FSER416
FPHE495
FHIS528
FHOH909
FHOH965

site_idAE6
Number of Residues6
Detailsbinding site for residue CA F 702
ChainResidue
FASP304
FASP307
FLEU309
FASP311
FILE313
FHOH814

site_idAE7
Number of Residues1
Detailsbinding site for residue CL F 704
ChainResidue
FASP590

site_idAE8
Number of Residues1
Detailsbinding site for residue SO4 F 705
ChainResidue
FARG519

site_idAE9
Number of Residues3
Detailsbinding site for residue SO4 F 706
ChainResidue
FARG124
FHOH827
FHOH942

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues6
DetailsActive site: {"description":"Acyl-ester intermediate","evidences":[{"source":"PubMed","id":"30979881","evidenceCode":"ECO:0000305"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues12
DetailsActive site: {"description":"Charge relay system","evidences":[{"source":"PubMed","id":"30979881","evidenceCode":"ECO:0000305"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues30
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"30979881","evidenceCode":"ECO:0000305"}]}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues30
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"30979881","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

238582

PDB entries from 2025-07-09

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