Summary Structural details Experimental details Functional details Sequence Neighbor History Downloads

6Q16

Focussed refinement of InvGN0N1:PrgHK:SpaPQR:PrgIJ from Salmonella SPI-1 injectisome NC-base

This is a non-PDB format compatible entry.

Functional Information from GO Data

Chain	GOid	namespace	contents
0	0005515	molecular_function	protein binding
0	0005886	cellular_component	plasma membrane
0	0009306	biological_process	protein secretion
0	0015031	biological_process	protein transport
0	0016020	cellular_component	membrane
1	0005515	molecular_function	protein binding
1	0005886	cellular_component	plasma membrane
1	0009306	biological_process	protein secretion
1	0015031	biological_process	protein transport
1	0016020	cellular_component	membrane
2	0005515	molecular_function	protein binding
2	0005886	cellular_component	plasma membrane
2	0009306	biological_process	protein secretion
2	0015031	biological_process	protein transport
2	0016020	cellular_component	membrane
3	0005515	molecular_function	protein binding
3	0005886	cellular_component	plasma membrane
3	0009306	biological_process	protein secretion
3	0015031	biological_process	protein transport
3	0016020	cellular_component	membrane
4	0005515	molecular_function	protein binding
4	0005886	cellular_component	plasma membrane
4	0009306	biological_process	protein secretion
4	0015031	biological_process	protein transport
4	0016020	cellular_component	membrane
5	0005515	molecular_function	protein binding
5	0005886	cellular_component	plasma membrane
5	0006605	biological_process	protein targeting
5	0016020	cellular_component	membrane
6	0005886	cellular_component	plasma membrane
6	0009306	biological_process	protein secretion
6	0016020	cellular_component	membrane
7	0005886	cellular_component	plasma membrane
7	0009306	biological_process	protein secretion
7	0016020	cellular_component	membrane
8	0005886	cellular_component	plasma membrane
8	0009306	biological_process	protein secretion
8	0016020	cellular_component	membrane
9	0005886	cellular_component	plasma membrane
9	0009306	biological_process	protein secretion
9	0016020	cellular_component	membrane
a	0005886	cellular_component	plasma membrane
a	0016020	cellular_component	membrane
A	0009306	biological_process	protein secretion
AA	0009306	biological_process	protein secretion
AB	0009306	biological_process	protein secretion
AC	0009306	biological_process	protein secretion
AD	0009306	biological_process	protein secretion
AE	0009306	biological_process	protein secretion
AF	0009306	biological_process	protein secretion
AG	0009306	biological_process	protein secretion
AH	0009306	biological_process	protein secretion
AI	0009306	biological_process	protein secretion
AJ	0009306	biological_process	protein secretion
AK	0009306	biological_process	protein secretion
AL	0009306	biological_process	protein secretion
AM	0015031	biological_process	protein transport
AN	0015031	biological_process	protein transport
AO	0015031	biological_process	protein transport
AP	0015031	biological_process	protein transport
AQ	0015031	biological_process	protein transport
AR	0015031	biological_process	protein transport
AS	0005576	cellular_component	extracellular region
AS	0009986	cellular_component	cell surface
AS	0015031	biological_process	protein transport
AS	0030254	biological_process	protein secretion by the type III secretion system
AS	0030257	cellular_component	type III protein secretion system complex
AS	0042802	molecular_function	identical protein binding
AT	0005576	cellular_component	extracellular region
AT	0009986	cellular_component	cell surface
AT	0015031	biological_process	protein transport
AT	0030254	biological_process	protein secretion by the type III secretion system
AT	0030257	cellular_component	type III protein secretion system complex
AT	0042802	molecular_function	identical protein binding
AU	0005576	cellular_component	extracellular region
AU	0009986	cellular_component	cell surface
AU	0015031	biological_process	protein transport
AU	0030254	biological_process	protein secretion by the type III secretion system
AU	0030257	cellular_component	type III protein secretion system complex
AU	0042802	molecular_function	identical protein binding
AV	0005576	cellular_component	extracellular region
AV	0009986	cellular_component	cell surface
AV	0015031	biological_process	protein transport
AV	0030254	biological_process	protein secretion by the type III secretion system
AV	0030257	cellular_component	type III protein secretion system complex
AV	0042802	molecular_function	identical protein binding
AW	0005576	cellular_component	extracellular region
AW	0009986	cellular_component	cell surface
AW	0015031	biological_process	protein transport
AW	0030254	biological_process	protein secretion by the type III secretion system
AW	0030257	cellular_component	type III protein secretion system complex
AW	0042802	molecular_function	identical protein binding
AX	0005576	cellular_component	extracellular region
AX	0009986	cellular_component	cell surface
AX	0015031	biological_process	protein transport
AX	0030254	biological_process	protein secretion by the type III secretion system
AX	0030257	cellular_component	type III protein secretion system complex
AX	0042802	molecular_function	identical protein binding
AY	0005576	cellular_component	extracellular region
AY	0009986	cellular_component	cell surface
AY	0015031	biological_process	protein transport
AY	0030254	biological_process	protein secretion by the type III secretion system
AY	0030257	cellular_component	type III protein secretion system complex
AY	0042802	molecular_function	identical protein binding
AZ	0005576	cellular_component	extracellular region
AZ	0009986	cellular_component	cell surface
AZ	0015031	biological_process	protein transport
AZ	0030254	biological_process	protein secretion by the type III secretion system
AZ	0030257	cellular_component	type III protein secretion system complex
AZ	0042802	molecular_function	identical protein binding
b	0005886	cellular_component	plasma membrane
b	0016020	cellular_component	membrane
B	0009306	biological_process	protein secretion
BA	0005576	cellular_component	extracellular region
BA	0009986	cellular_component	cell surface
BA	0015031	biological_process	protein transport
BA	0030254	biological_process	protein secretion by the type III secretion system
BA	0030257	cellular_component	type III protein secretion system complex
BA	0042802	molecular_function	identical protein binding
BB	0005576	cellular_component	extracellular region
BB	0009986	cellular_component	cell surface
BB	0015031	biological_process	protein transport
BB	0030254	biological_process	protein secretion by the type III secretion system
BB	0030257	cellular_component	type III protein secretion system complex
BB	0042802	molecular_function	identical protein binding
BC	0005576	cellular_component	extracellular region
BC	0009986	cellular_component	cell surface
BC	0015031	biological_process	protein transport
BC	0030254	biological_process	protein secretion by the type III secretion system
BC	0030257	cellular_component	type III protein secretion system complex
BC	0042802	molecular_function	identical protein binding
BD	0005576	cellular_component	extracellular region
BD	0009986	cellular_component	cell surface
BD	0015031	biological_process	protein transport
BD	0030254	biological_process	protein secretion by the type III secretion system
BD	0030257	cellular_component	type III protein secretion system complex
BD	0042802	molecular_function	identical protein binding
BE	0005576	cellular_component	extracellular region
BE	0009986	cellular_component	cell surface
BE	0015031	biological_process	protein transport
BE	0030254	biological_process	protein secretion by the type III secretion system
BE	0030257	cellular_component	type III protein secretion system complex
BE	0042802	molecular_function	identical protein binding
c	0005886	cellular_component	plasma membrane
c	0016020	cellular_component	membrane
C	0009306	biological_process	protein secretion
d	0005886	cellular_component	plasma membrane
d	0016020	cellular_component	membrane
D	0009306	biological_process	protein secretion
e	0005886	cellular_component	plasma membrane
e	0016020	cellular_component	membrane
E	0005886	cellular_component	plasma membrane
E	0016020	cellular_component	membrane
f	0005886	cellular_component	plasma membrane
f	0016020	cellular_component	membrane
F	0009306	biological_process	protein secretion
g	0005886	cellular_component	plasma membrane
g	0016020	cellular_component	membrane
G	0009306	biological_process	protein secretion
h	0005886	cellular_component	plasma membrane
h	0016020	cellular_component	membrane
H	0009306	biological_process	protein secretion
i	0005886	cellular_component	plasma membrane
i	0016020	cellular_component	membrane
I	0009306	biological_process	protein secretion
j	0005886	cellular_component	plasma membrane
j	0016020	cellular_component	membrane
J	0009306	biological_process	protein secretion
k	0005886	cellular_component	plasma membrane
k	0016020	cellular_component	membrane
K	0009306	biological_process	protein secretion
l	0005886	cellular_component	plasma membrane
l	0016020	cellular_component	membrane
L	0009306	biological_process	protein secretion
m	0005886	cellular_component	plasma membrane
m	0016020	cellular_component	membrane
M	0009306	biological_process	protein secretion
n	0005886	cellular_component	plasma membrane
n	0016020	cellular_component	membrane
N	0009306	biological_process	protein secretion
o	0009306	biological_process	protein secretion
O	0009306	biological_process	protein secretion
p	0009306	biological_process	protein secretion
P	0009306	biological_process	protein secretion
q	0009306	biological_process	protein secretion
Q	0009306	biological_process	protein secretion
r	0009306	biological_process	protein secretion
R	0005886	cellular_component	plasma membrane
R	0016020	cellular_component	membrane
s	0009306	biological_process	protein secretion
S	0005886	cellular_component	plasma membrane
S	0016020	cellular_component	membrane
t	0009306	biological_process	protein secretion
T	0005886	cellular_component	plasma membrane
T	0016020	cellular_component	membrane
u	0009306	biological_process	protein secretion
U	0005886	cellular_component	plasma membrane
U	0016020	cellular_component	membrane
v	0009306	biological_process	protein secretion
V	0005886	cellular_component	plasma membrane
V	0016020	cellular_component	membrane
w	0009306	biological_process	protein secretion
W	0005886	cellular_component	plasma membrane
W	0016020	cellular_component	membrane
x	0009306	biological_process	protein secretion
X	0005886	cellular_component	plasma membrane
X	0016020	cellular_component	membrane
y	0009306	biological_process	protein secretion
Y	0005886	cellular_component	plasma membrane
Y	0016020	cellular_component	membrane
z	0009306	biological_process	protein secretion
Z	0005886	cellular_component	plasma membrane
Z	0016020	cellular_component	membrane

Functional Information from PROSITE/UniProt

site_id	PS01060
Number of Residues	16
Details	FLIP_1 Flagella transport protein fliP family signature 1. PAYaLSEIksAFKIGF

Chain	Residue	Details
0	PRO148-PHE163

site_id	PS01061
Number of Residues	13
Details	FLIP_2 Flagella transport protein fliP family signature 2. PIKLVLFVaLDGW

Chain	Residue	Details
0	PRO196-TRP208

site_id	PS00875
Number of Residues	34
Details	T2SP_D Bacterial type II secretion system protein D signature. GKSLLVGGYtrdantdtvqsIPFLGkLPLIgs.LF

Chain	Residue	Details
A	GLY464-PHE497

Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI1
Number of Residues	160
Details	TRANSMEM: Helical => ECO:0000255

Chain	Residue	Details
6	LEU16-PHE36
2	VAL55-PHE75
2	ILE161-LEU181
2	MET185-LEU205
3	ILE8-VAL28
3	VAL55-PHE75
3	ILE161-LEU181
3	MET185-LEU205
4	ILE8-VAL28
4	VAL55-PHE75
4	ILE161-LEU181
6	LEU53-SER73
4	MET185-LEU205
k	ILE142-ILE162
l	ILE142-ILE162
m	ILE142-ILE162
n	ILE142-ILE162
7	LEU16-PHE36
7	LEU53-SER73
8	LEU16-PHE36
8	LEU53-SER73
9	LEU16-PHE36
9	LEU53-SER73
2	ILE8-VAL28

site_id	SWS_FT_FI2
Number of Residues	24
Details	LIPID: S-diacylglycerol cysteine => ECO:0000255\|PROSITE-ProRule:PRU00303

Chain	Residue	Details
AA	CYS18
AL	CYS18
o	CYS18
p	CYS18
q	CYS18
r	CYS18
s	CYS18
t	CYS18
u	CYS18
v	CYS18
w	CYS18
AB	CYS18
x	CYS18
y	CYS18
z	CYS18
AJ	CYS18
AK	CYS18
AC	CYS18
AD	CYS18
AE	CYS18
AF	CYS18
AG	CYS18
AH	CYS18
AI	CYS18

		Sequence (fasta)
		PDBx/mmCIF
		PDBML format (no-atom)
		Validation report (PDF)