Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6PLD

Crystal Structure of Pseudomonas aeruginosa D-Arginine Dehydrogenase Y249F variant with 6-OH-FAD - Green fraction

Functional Information from GO Data
ChainGOidnamespacecontents
A0000166molecular_functionnucleotide binding
A0005737cellular_componentcytoplasm
A0006525biological_processarginine metabolic process
A0006527biological_processarginine catabolic process
A0008718molecular_functionD-amino-acid dehydrogenase activity
A0016491molecular_functionoxidoreductase activity
Functional Information from PDB Data
site_idAC1
Number of Residues43
Detailsbinding site for residue 6FA A 1401
ChainResidue
AILE1009
AHIS1040
ASER1041
ATHR1042
AARG1044
ASER1045
AALA1046
AALA1047
AHIS1048
AGLU1170
AALA1171
AGLY1010
AALA1199
AGLY1200
ATRP1202
AILE1206
AARG1222
APHE1249
AGLY1303
AARG1305
AGLN1330
AGLY1331
AGLY1012
AGLY1332
ATYR1333
AGLY1334
AILE1335
AGLN1336
AHOH1561
AHOH1582
AHOH1598
AHOH1603
AHOH1693
AILE1013
AHOH1694
AHOH1697
AHOH1711
AHOH1757
AALA1014
ALEU1031
AGLU1032
AARG1033
AGLU1034

site_idAC2
Number of Residues8
Detailsbinding site for residue PEG A 1402
ChainResidue
ATYR1020
ATRP1021
ASER1023
AALA1024
APRO1073
AASN1161
AHOH1525
AHOH1528

site_idAC3
Number of Residues5
Detailsbinding site for residue GOL A 1403
ChainResidue
AGLU1034
AALA1035
AGLN1036
ATYR1039
AHOH1660

site_idAC4
Number of Residues5
Detailsbinding site for residue GOL A 1404
ChainResidue
AGLY1043
ASER1045
AGLN1162
AHIS1299
AHOH1606

site_idAC5
Number of Residues7
Detailsbinding site for residue GOL A 1405
ChainResidue
APHE1092
ASER1093
ASER1243
AASP1245
ASER1247
AHOH1636
AHOH1644

site_idAC6
Number of Residues6
Detailsbinding site for residue GOL A 1406
ChainResidue
ALEU1115
AASP1117
AGLN1120
AARG1175
AGLY1362
AHOH1680

site_idAC7
Number of Residues8
Detailsbinding site for residue GOL A 1407
ChainResidue
AASP1245
AGLU1246
APRO1261
AALA1262
AHOH1509
AHOH1573
AHOH1645
AHOH1715

site_idAC8
Number of Residues4
Detailsbinding site for residue GOL A 1408
ChainResidue
ALYS1220
APHE1307
AHOH1504
AHOH1710

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues5
DetailsBINDING: BINDING => ECO:0000269|PubMed:20809650, ECO:0000269|PubMed:21707047
ChainResidueDetails
AALA1014
AGLU1032
ASER1041
AALA1171
AGLY1331

site_idSWS_FT_FI2
Number of Residues1
DetailsSITE: Important for specificity toward positively charged substrates => ECO:0000269|PubMed:20809650
ChainResidueDetails
AGLU1087

222624

PDB entries from 2024-07-17

PDB statisticsPDBj update infoContact PDBjnumon